DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and cyp-13A8

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_496115.1 Gene:cyp-13A8 / 188358 WormBaseID:WBGene00011674 Length:509 Species:Caenorhabditis elegans


Alignment Length:562 Identity:134/562 - (23%)
Similarity:234/562 - (41%) Gaps:118/562 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFGSLLLGIATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFG--------SFPN----MIWPRQH 53
            :|..:|:.|.|     |.|....|  |:|||:..|..:|:||        |||.    ..|.:::
 Worm     2 IFELILISIVT-----YYFWHWTF--WKRRGLPGPWGVPIFGKAGAMLEDSFPPGYTLQKWTKEY 59

  Fly    54 -----FTMDMRDIYMHYRNTHSYVGCYLLRAPKLLVLEPRLVYEIYVSAFSHF---ENNDASKMV 110
                 ||..|:.:                    :::.:|.||.||.|..:.:|   ::|......
 Worm    60 GKIYGFTEGMQKV--------------------MVISDPDLVQEILVKQYDNFYGRKHNPVQGDP 104

  Fly   111 DIAKDRLVALNPFVLEGEEWRHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLD 175
            |..||    ::....:|..|:..|.:.:...:||.|:.....|:....:|.:.:..:|..||   
 Worm   105 DKDKD----IHIVGAQGFRWKRLRTITAPAFSNGSIKKVLTTMEDSTQELMKKLREESENGK--- 162

  Fly   176 CIDLGLRFTGESLFDCV----LGIQARTFTDNPLPVVRQNHEMSAENRGLAIAGAVHGLFP---N 233
            .:::.| |..|..||.:    :|........|||  ::........||..  .....|.||   :
 Worm   163 AVNMHL-FYQEYTFDVISRVAMGQPDSQMFKNPL--LKDVKGFFEHNRWQ--IWMFSGGFPFAVS 222

  Fly   234 LPRWLRPKV--FPRSHDRFYGQMISEALRLRRSKHQ----------ERNDFINHLLEMQRELD-- 284
            ..:||..||  |.........:.:::|:..|.::.:          |..|:|:..|..:.|::  
 Worm   223 FLKWLFIKVGKFGAGPFIVVQKSVTDAVMSRIAQREADKKHGVEPGEAADYIDMFLNARAEVEHF 287

  Fly   285 -----------------LSEEDMASHAMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEELQL 332
                             |:.:::.|....|:..|.|||:.|:::....|..||..|.:|.:|:..
 Worm   288 GESNDEFHKSSSYNNRQLTTQEIISQCFVFLVAGFDTTAISLSYVTYFLALNPKIQSKLQDEVDK 352

  Fly   333 VNPGGYLPDLDALIDLPYLSACFNESLRIYPAGGWA-SKTCTKEYELRGSHHSEPLKLRPGDHVM 396
            ..|...: ..|.|..|.|:.....||||::|...:| |:.|     :|.:...|.: :..|..||
 Worm   353 ECPNDEI-TFDQLSKLKYMDNVIKESLRLFPFASFANSRRC-----MRNTVIGEQI-VEAGVDVM 410

  Fly   397 VPIYALHNDPDLY-PEPDVFRPERFLDGGLKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAA 460
            :..:.||:|.::: .:.:.|:|||: |..|   ..|..:|.||.|||.|:|||..|...|..|:.
 Worm   411 IDTWTLHHDKNVWGNDVEEFKPERW-DSPL---TPQQAYLSFGAGPRVCLGMRFALLEQKGLLSH 471

  Fly   461 IVQRFEVVVSPRTLNGTELDPLIFVG---VHKGGIWLQFVPR 499
            |::::....:.:    |:| |:..||   .....::|...||
 Worm   472 ILKKYTFETNAK----TQL-PIKLVGRATARPENLFLSLKPR 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 120/514 (23%)
cyp-13A8NP_496115.1 p450 27..503 CDD:278495 120/523 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28638
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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