DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp28c1 and cyp-13A5

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_496112.1 Gene:cyp-13A5 / 188356 WormBaseID:WBGene00011672 Length:520 Species:Caenorhabditis elegans


Alignment Length:553 Identity:140/553 - (25%)
Similarity:229/553 - (41%) Gaps:96/553 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SLLLGIATLLGAI-YAFLVSNFGHWRRRGVTEPRALPLFGSFPNMIWPRQHFTMDMRDIYMHYRN 67
            |:|:..|:.:|.: |...:.:|  |.|:||..||..|.||....               :..|.|
 Worm     4 SILIAGASFIGLLTYYIWIWSF--WIRKGVKGPRGFPFFGVIHE---------------FQDYEN 51

  Fly    68 ---------THSYVGCYLLR---APKLLVLEPRLVYEIYVSAFSHFENNDASKMV-DIAKDRLVA 119
                     |..|...|.:.   ...|:|..|..|:|::|..|.:|.....:.:. |..|::...
 Worm    52 PGLLKLGEWTKEYGPIYGITEGVEKTLIVSNPEFVHEVFVKQFDNFYGRKTNPIQGDPNKNKRAH 116

  Fly   120 LNPFVLEGEEWRHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFT 184
            |  ...:|..|:..|.:.|...:|..:|...:.::...::|.:.:...||.||.:|.:|....||
 Worm   117 L--VSAQGHRWKRLRTLSSPTFSNKNLRKIMSTVEETVVELMRHLDDASAKGKAVDLLDYYQEFT 179

  Fly   185 GESLFDCVLGIQARTFTDNP-LPVVRQNHEMSAENRGLAIAGAVHGLFPNLPRWLRP--KVFPRS 246
            .:.:....:|........|| ||.|:     .....|..:...|.|:||......|.  ..||..
 Worm   180 LDIIGRIAMGQTESLMFRNPMLPKVK-----GIFKDGRKLPFLVSGIFPIAGTMFREFFMRFPSI 239

  Fly   247 HDRF-YGQMISEALRLRRSKHQ-----------ERNDFINHLLEMQRELDLSEEDMA-------- 291
            ...| ....:.:||..|..:..           |..|||:..|:.:..:|..||:.|        
 Worm   240 QPAFDIMSTVEKALNKRLEQRAADEKAGIEPSGEPQDFIDLFLDARANVDFFEEESALGFAKTEI 304

  Fly   292 -------------SHAMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEELQLVNPGGYLPDL- 342
                         .....|:..|.|||:.|:::...||.|:|:.|::|.||:....|.   |:: 
 Worm   305 AKVDKQLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKKLQEEVDRECPN---PEVT 366

  Fly   343 -DALIDLPYLSACFNESLRIYPAGGWA-SKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYALHND 405
             |.:..|.|:.....|:||:||..... ::.|.||..:.|      :::..|.:|.|..:.||.|
 Worm   367 FDQISKLKYMECVVKEALRMYPLASIVHNRKCMKETNVLG------VQIEKGTNVQVDTWTLHYD 425

  Fly   406 PDLYPE-PDVFRPERFLDGGLKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFEVVV 469
            |.::.| .:.|||||: :.|.:....:|.:|.||.|||.|:||||.:...|..|..|::::....
 Worm   426 PKVWGEDANEFRPERW-ESGDELFYAKGGYLPFGMGPRICIGMRLAMMEKKMLLTHILKKYTFET 489

  Fly   470 SPRTLNGTELDPLIFVG---VHKGGIWLQFVPR 499
            |.:    ||: ||..||   .....:.|:..||
 Worm   490 STQ----TEI-PLKLVGSATTAPRSVMLKLTPR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 127/507 (25%)
cyp-13A5NP_496112.1 p450 33..514 CDD:278495 128/517 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28638
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

Return to query results.
Submit another query.