DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and cyp-13A4

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_496111.1 Gene:cyp-13A4 / 188355 WormBaseID:WBGene00011671 Length:520 Species:Caenorhabditis elegans


Alignment Length:555 Identity:138/555 - (24%)
Similarity:238/555 - (42%) Gaps:104/555 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GSLLLGIATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFGSF--------PNMI----WPRQHFT 55
            |:|.:|..|....|::|       |.|:||..||..|.||..        |.::    |.:::.:
 Worm     9 GALFIGFLTYYIWIWSF-------WIRKGVKGPRGFPFFGVILKFHDYENPGLLKLGEWTKKYGS 66

  Fly    56 MDMRDIYMHYRNTHSYVGCYLLRAPKLLVLEPRLVYEIYVSAFSHFENNDASKMV-DIAKDRLVA 119
            :        |..|...       ...|:|..|..|:|::|..|.:|.....:.:. |..|::...
 Worm    67 I--------YGITEGV-------EKTLVVSNPEFVHEVFVKQFDNFYGRKTNPIQGDPNKNKRAH 116

  Fly   120 LNPFVLEGEEWRHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFT 184
            |  .:.:|..|:..|.:.|...:|..:|...:.::...::|.:.:...||.||.:|.:|....||
 Worm   117 L--VLAQGHRWKRLRTLASPTFSNKSLRKIMSTVEETVVELMRHLDEASAKGKAVDLLDYYQEFT 179

  Fly   185 GESLFDCVLGIQARTFTDNP-LPVVRQNHEMSAENRGLAIAGAVHGLFP---NLPRWLRPKVFPR 245
            .:.:....:|........|| ||.|::..:     :|..:...:.|:||   .|.|.|..| ||:
 Worm   180 LDIIGRIAMGQTESLMFRNPMLPKVKEIFK-----KGGKMPFLIAGVFPIAGTLMRQLFMK-FPK 238

  Fly   246 SHDRFYGQM--ISEALRLRRSKHQ-----------ERNDFINHLLEMQRELDLSEE--------- 288
            ....| |.|  :.:||..|..:..           |..|||:..|:.:..:|..||         
 Worm   239 FSPAF-GIMNTMEKALNKRLEQRAADKKAGIEPSGEPQDFIDLFLDARANVDFIEEESTLGFAKS 302

  Fly   289 ------------DMASHAMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEELQLVNPGGYLPD 341
                        ::......|:..|.|||:.|:::...||..:|:.|::|.||:....|.   |:
 Worm   303 EVLKVDKHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLATHPEIQKKLQEEVDRECPD---PE 364

  Fly   342 L--DALIDLPYLSACFNESLRIYPAGGWA-SKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYALH 403
            :  |.:..|.|:.....|:||:||..... ::.|.|:..:.|      :::..|.:|.|..:.||
 Worm   365 VTFDQISKLKYMECVVKEALRMYPLASLVHNRKCMKKTNVLG------VEIDEGTNVQVDTWTLH 423

  Fly   404 NDPDLY-PEPDVFRPERFLDGGLKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFEV 467
            .||.:: .:...|:|||: :.|.:....:|.:|.||.|||.|:||||.:...|..|..|::::..
 Worm   424 YDPKVWGDDASEFKPERW-ETGDELFYAKGGYLPFGMGPRICIGMRLAMMEEKLLLTHILKKYTF 487

  Fly   468 VVSPRTLNGTELDPLIFVG---VHKGGIWLQFVPR 499
            ..|..    ||: ||..||   :....:.|:..||
 Worm   488 DTSTE----TEI-PLKLVGSATIAPRNVMLKLTPR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 125/509 (25%)
cyp-13A4NP_496111.1 p450 33..514 CDD:278495 126/519 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28638
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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