DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and cyp-13B2

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_510369.2 Gene:cyp-13B2 / 187068 WormBaseID:WBGene00010606 Length:511 Species:Caenorhabditis elegans


Alignment Length:529 Identity:121/529 - (22%)
Similarity:222/529 - (41%) Gaps:105/529 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LGIATLLGAIYAFLVSNF----GHWRRRGVTEPRALPLFGSFPNMI---WPR----QHFTMDMRD 60
            :|:...|.||...:...|    .:|:|||:..|..||..|||.::.   .||    ..:|.....
 Worm     1 MGVIVCLVAIIGVVAGYFKWIHSYWKRRGIEGPVGLPFIGSFYDLADREKPRGFIINKWTKMFGK 65

  Fly    61 IYMHYRNTHSYVGCYLLRAPKLLVLEPRLVYEIYVSAFSHFENNDASKMVDIAKDRLVA------ 119
            ::.:|...          .|.|:|.:..::.|:::..|..|.   |.|..::....|..      
 Worm    66 VFGYYEGV----------IPVLVVSDLDMLQEMFIKKFDCFY---ARKTTNLIHGNLECSQEEPR 117

  Fly   120 LNPFVLEGEEWRHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFT 184
            :|.|...|..|:..||:.|...:...::..|..|:.....:...:: |...|:..:..:....||
 Worm   118 VNLFAARGARWKRLRALASPAFSVKALKQIHETMEDSVFSMVDHMS-KQVNGEAFNIHEYYQEFT 181

  Fly   185 GESLFDCVLGIQARTFTDNPLPVVRQNHEMSAENRGLAIAGAV----HGLFPNLPRWLRPKVFPR 245
            .:.:....:|               |.:.....|.|:.|...:    :.::|    |....:||.
 Worm   182 YDVISRLAMG---------------QTYSEQFNNEGVDIVKKIFLRKNRVYP----WYLAVMFPG 227

  Fly   246 ----------SHDRFYGQMISEALRLRRSKHQER----------------NDFINHLLE------ 278
                      :|:...|..:.:.|:...:...:|                ||||:..|:      
 Worm   228 FENTIKNTFFNHEAVRGGDVGKLLKFCETAVHDRLKERADNVEQGIENPHNDFIDMFLDYYTDTN 292

  Fly   279 -------MQRELDLSEEDMASHAMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEELQLVNPG 336
                   ::.|..::.||:......|:..|.|||:|::|:...||.::|...|::.:|:..:...
 Worm   293 IEDNAFGIKVEKKVTSEDVIGACFVFLLAGFDTTANTLAYASYLLAKHPQEMRKVQDEIDRICTS 357

  Fly   337 GYLPDLDALIDLPYLSACFNESLRIYPAGGWA-SKTCTKEYELRGSHHSEPLKLRPGDHVMVPIY 400
            .:: ..|.:..|.|:.|...|:||:||...:| |:.|.:...| |:::.|     .|..:...:.
 Worm   358 EHI-SYDDIGKLRYMDAVIREALRMYPVAWFACSRECVQATTL-GNYYIE-----KGVRIEADVR 415

  Fly   401 ALHNDPDLY-PEPDVFRPERFLDGGLKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQR 464
            |||...::: ...:.|.|||:|:...::...   ::.||.||||||||||||:.||.|||.:::|
 Worm   416 ALHYSEEIWGKNANEFVPERWLESSPRHNMS---WIPFGAGPRQCVGMRLGLSEAKTALAHLLRR 477

  Fly   465 FEVVVSPRT 473
            |.::..|:|
 Worm   478 FSILAGPKT 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 112/497 (23%)
cyp-13B2NP_510369.2 p450 32..490 CDD:278495 112/498 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28638
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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