DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and cyp-13A12

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_499705.1 Gene:cyp-13A12 / 184473 WormBaseID:WBGene00008810 Length:518 Species:Caenorhabditis elegans


Alignment Length:548 Identity:138/548 - (25%)
Similarity:243/548 - (44%) Gaps:89/548 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLLGIATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFGSFPNMI------------WPRQHFTMD 57
            :.|.|.|.:..:.:|.:..:.:|:|||:..|...|:.||...|:            |.:|:..: 
 Worm     4 IFLAILTSIIGVLSFYLWTWSYWKRRGIAGPSGYPILGSALEMLSSENPPYLQLKEWTKQYGKV- 67

  Fly    58 MRDIYMHYRNTHSYVGCYLLRAPKLLVLEPRLVYEIYVSAFSHFENNDASKMV-DIAKDRLVALN 121
                   |..|..     |.|.  |::.:|.||.|::|..:.:|.....:.:. |..||:.|  |
 Worm    68 -------YGITEG-----LSRT--LVISDPDLVQEVFVKQYDNFFGRKLNPIQGDPNKDKRV--N 116

  Fly   122 PFVLEGEEWRHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTGE 186
            .|..:|..|:..|.:.|...:|..:|.....::...::|.:.|...:.||:.:|.:|....||.:
 Worm   117 LFSSQGHRWKRLRTISSPTFSNNSLRKLKTTVEECAVELLRHIEQHTDGGQPIDLLDFYQEFTLD 181

  Fly   187 SLFDCVLGIQARTFTDNP-LPVVRQNHEMSAENRGLAIAGAVHGLFPNLPRWLRPKVF------- 243
            .:....:|........|| ||.||.  ......:||.::|:   |.|.:...||..:|       
 Worm   182 VIGRIAMGQTDSQMFKNPLLPYVRA--VFGEPRKGLFLSGS---LAPWIGPILRMVMFSLPNIVK 241

  Fly   244 -PRSH-DRFYGQMISEALRLRRSKHQ------ERNDFINHLL-------EMQRELD--------- 284
             |..| .|.....:.:.::||.:..:      |..|||:..|       |::...|         
 Worm   242 NPAVHVIRHTSNAVEQRVKLRMADEKAGIDPGEPQDFIDLFLDAKSDDVELENNEDFTKAGVKVT 306

  Fly   285 --LSEEDMASHAMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEEL--QLVNPGGYLPDLDAL 345
              |:.|::......|:..|.|||:.|:::...||..:|..|::|.||:  :..:|.   ...|.|
 Worm   307 RQLTTEEIVGQCFVFLIAGFDTTALSLSYSSFLLATHPKVQKKLQEEIDRECADPE---VTFDQL 368

  Fly   346 IDLPYLSACFNESLRIYPAGGWASKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYALHNDPDLYP 410
            ..|.|:.....|:||:||.|..|:..|.......|::     ::..|.:::...:.||:|..::.
 Worm   369 SKLKYMECVIKETLRMYPLGALANSRCCMRATKIGNY-----EIDEGTNILCDTWTLHSDKSIWG 428

  Fly   411 E-PDVFRPERFLDGGLKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFEVVVSPRTL 474
            | .:.|:|||: :.|.::..|:|.::.||.|||||:||||.....|..|:.|::::.:.|    .
 Worm   429 EDAEEFKPERW-ESGDEHFYQKGGYIPFGLGPRQCIGMRLAYMEEKLLLSHILRKYTLEV----C 488

  Fly   475 NGTELDPLIFVG---VHKGGIWLQFVPR 499
            |.|:: ||..:|   .....:||...||
 Worm   489 NKTQI-PLKLIGSRTTQPESVWLNLTPR 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 126/504 (25%)
cyp-13A12NP_499705.1 p450 33..507 CDD:278495 126/509 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28638
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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