DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and cyp-13A11

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_499704.1 Gene:cyp-13A11 / 184472 WormBaseID:WBGene00008809 Length:517 Species:Caenorhabditis elegans


Alignment Length:551 Identity:133/551 - (24%)
Similarity:247/551 - (44%) Gaps:96/551 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLLGIATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFGSFPNMIWPRQHFTMDMRDIYMHYRN-- 67
            ||..:::::| |.::....:.:|||.|:..|:..|..||           .:||.|    :.|  
 Worm     4 LLFVVSSVVG-IVSYYFWTWTYWRRCGIPGPQGYPFLGS-----------ALDMMD----HENPP 52

  Fly    68 -------THSYVGCY-----LLRAPKLLVLEPRLVYEIYVSAFSHFENNDASKMV-DIAKDRLVA 119
                   |..|...|     |||.  |::.:..|::|::|..:.:|...:.:.:. |..:::.|.
 Worm    53 FLQLKKWTSQYGKVYGITEGLLRT--LVISDTNLIHEVFVKQYDNFYGRNLNPIQGDPNREKRVT 115

  Fly   120 LNPFVLEGEEWRHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFT 184
            |  |..:|..|:..|.:.:...::..:|.....::...|:|.:.|...:||||.:|.::....||
 Worm   116 L--FSAQGHRWKRLRTIANPTFSSNNLRKIQVTVEDSALELLRHIEQHTAGGKAIDVLEYFQEFT 178

  Fly   185 GESLFDCVLGIQARTFTDNP-LPVVRQNHEMSAENRGLAIAGAVHGLFPNLPRWLRPKVF----- 243
            .:.:....:|........|| ||..|.  ........|.::|.   |||.:...:|..||     
 Worm   179 MDVIGRIAMGQPDSLMFKNPLLPCARD--VFGKPRTALFLSGI---LFPWIGPMIRKVVFYFTNV 238

  Fly   244 ---PRSHDRFY-GQMISEALRLRRSKHQ------ERNDFINHLL-------EMQRELD------- 284
               |.:...:. ...:.:.::.|.::.:      |..|||:..|       |::...|       
 Worm   239 FNNPAAQIMYQTANAVEQRIKQRMAEEKAGIDPGEPQDFIDLFLDAKSDDMELENNEDFTKAGVK 303

  Fly   285 ----LSEEDMASHAMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEEL--QLVNPGGYLPDLD 343
                |:::::......|:..|.|||:.|:::...||..:|..|::|.||:  :..:|.   ...|
 Worm   304 VTRQLTKDEVVGQCFVFLIAGFDTTALSLSYSSFLLATHPKAQKKLQEEIDRECADPE---VTFD 365

  Fly   344 ALIDLPYLSACFNESLRIYPAGGWA-SKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYALHNDPD 407
            .|..|.|:.....|:||:||.|..| |:.|.:..:: |::     ::..|..::...:.||.|..
 Worm   366 QLSKLKYMECVIKETLRMYPLGALANSRRCMRSTKI-GNY-----EIEKGVDILCDTWTLHYDKS 424

  Fly   408 LYPE-PDVFRPERFLDGGLKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFEVVVSP 471
            ::.| .:.|:|||: :.|.::..|:|.::.||.|||||:||||.....|..|:.|::::.:.|  
 Worm   425 IWGEDAEEFKPERW-ESGDEHFYQKGGYIPFGLGPRQCIGMRLAYMEEKLLLSHILRKYTLEV-- 486

  Fly   472 RTLNGTELDPLIFVG---VHKGGIWLQFVPR 499
              .|.|:: ||..:|   .....:||...||
 Worm   487 --CNKTQI-PLKLIGSRTTQPESVWLNLTPR 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 121/507 (24%)
cyp-13A11NP_499704.1 p450 31..506 CDD:278495 121/513 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28638
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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