DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and cyp-25A1

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_497775.3 Gene:cyp-25A1 / 183247 WormBaseID:WBGene00007963 Length:502 Species:Caenorhabditis elegans


Alignment Length:502 Identity:111/502 - (22%)
Similarity:218/502 - (43%) Gaps:74/502 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLGIATLLGAIYAFLV-------SNFGHWRRRGVTEPRALPLFGSFPNMIWPRQHFTMD-----M 58
            ||.:::|:.:|:.|.:       ..|....:.|::.|......|:.......::....|     .
 Worm     3 LLILSSLVISIFTFFIYIILARRERFKLREKIGLSGPEPHWFLGNLKQTAERKEKLGYDDANRWF 67

  Fly    59 RDIYMHYRNTHSYVGCYLLRAPKLLVLEPRLVYEIYVSAFSHFENNDASKMVDIAKDRLVA---L 120
            .:::..|..|   .|.|......:::...:.:.|:::..||:|.:.....:.:  .::|.|   :
 Worm    68 NELHEQYGET---FGIYYGSQMNIVISNEKDIKEVFIKNFSNFSDRSVPSIYE--ANQLTASLLM 127

  Fly   121 NPFVLEGEEWRHQRAVFSTLLTNGRIRT-THAIMQRVCLDLCQFIAIKSAGGKDLDCID----LG 180
            |.:   ...|:|.|:..:.:.:.|:::. ...|..:|.|.| ..:..|::.|:..|..|    |.
 Worm   128 NSY---SSGWKHTRSAIAPIFSTGKMKAMQETINSKVDLFL-DILREKASSGQKWDIYDDFQGLT 188

  Fly   181 LRFTGESLF----DC------VLGIQARTFTDNPLPVVRQNHEMSAENRGLAIAGAVHGLFPNLP 235
            |...|:..|    :|      |..:.|:.:..|    :...|..       .||.:|  |.|.|.
 Worm   189 LDVIGKCAFAIDSNCQRDRNDVFYVNAKKYISN----IDIRHSK-------IIAASV--LLPELS 240

  Fly   236 RWLRP--KVFPRSHDRFYGQMISEALR--LRRSKHQERNDFINHL-LEMQRELD----LSEEDMA 291
            .:.:.  |..|.:....   .:.|.|.  ..|.:..|.:|.::.| |.:.||.|    ::::::.
 Worm   241 TFWKALYKYTPLADAEI---PLVEGLSNVYERRRGGEGSDSVDLLKLLLNREDDKSKPMTKQEVI 302

  Fly   292 SHAMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEELQLVNPGGYLPDLDALIDLPYLSACFN 356
            .:...|:..|.:|||.::.:|..||.:.|:.|::||||:......|.| ..|::.::.||...:.
 Worm   303 ENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEEIMEAKENGGL-TYDSIHNMKYLDCVYK 366

  Fly   357 ESLRIY-PAGGWASKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYALHNDPDLYPEPDVFRPERF 420
            |:||.| |...:..:.|.::..:||..:.:      |..|:...:.:|.:|:.:..|:.|.||||
 Worm   367 ETLRFYPPVIHFIRRLCREDITIRGQFYPK------GAIVVCLPHTVHRNPENWDSPEEFHPERF 425

  Fly   421 LDGGLKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFEV 467
            .:...|:...:  ::.||.|||.|||||......|..:..::..||:
 Worm   426 ENWEEKSSSLK--WIPFGVGPRYCVGMRFAEMEFKTTIVKLLDTFEL 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 104/466 (22%)
cyp-25A1NP_497775.3 p450 37..496 CDD:278495 104/468 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28638
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.890

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