DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and cyp-13B1

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_510233.1 Gene:cyp-13B1 / 181462 WormBaseID:WBGene00008519 Length:510 Species:Caenorhabditis elegans


Alignment Length:527 Identity:132/527 - (25%)
Similarity:230/527 - (43%) Gaps:102/527 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LGIATLLGAIYAFLVSNF----GHWRRRGVTEPRALPLFGSFPNMIWPRQHFTMDMRDI-----Y 62
            :|...:|..::|.:...|    .:|||||::.|..||..|::           .|:.|:     |
 Worm     1 MGAIIVLVVLFATIAGYFKWIHTYWRRRGISGPEGLPFIGNY-----------YDLADVNKPRGY 54

  Fly    63 MHYRNTHSY---VGCYLLRAPKLLVLEPRLVYEIYVSAFSHF----ENNDASKMVDIAKDRLVAL 120
            :.::.|..:   .|.|....|.|:|.:..::.|:::..|.:|    ..|.....::.:|.. ..:
 Worm    55 LIHKWTQKFGKVFGYYEGAVPVLVVSDMDMLQELFLKKFDNFYARKSTNHIHGNLECSKSE-PRI 118

  Fly   121 NPFVLEGEEWRHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTG 185
            |.|...|..|:..||:.|...:...::..|.:|:...:::...:| |...||..:.......||.
 Worm   119 NLFTSRGARWKRLRALASPGFSVKALKQVHDVMEDSAINMVDLMA-KHEDGKPFNIHAYFQEFTY 182

  Fly   186 ESLFDCVLGIQARTFTDNPLPVVRQNHEMSAENRGLAIAGAV----HGLFPNLPRWLRPKVFPR- 245
            :.:....:|              :.|.|: ..|.|:.|..::    |.:.|    |....:||: 
 Worm   183 DVISRLAMG--------------QPNSEL-FNNSGVEIVKSIFMRTHRVLP----WYFTVLFPQF 228

  Fly   246 ---------SHDRFYGQMISEALRLRR----SKHQER------------NDFI----NHLLEMQR 281
                     :|....|..|.:.|.:.:    |:.|||            ||||    |:..|...
 Worm   229 EHLVKRMFYNHAAVQGGDIEKLLLICKKTVESRIQEREENAKLGFENAENDFIDMFLNYYSEQVE 293

  Fly   282 ELD--------LSEEDMASHAMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEELQLVNPGGY 338
            :::        ::.||:......|:..|.|||:||:|:...||.::|:..:...||:..| .|..
 Worm   294 DIEFGSTVEKKVTAEDVIGACFVFLLAGFDTTANSLAYASYLLAKHPEKMKLAQEEVDTV-VGSE 357

  Fly   339 LPDLDALIDLPYLSACFNESLRIYPAGGWA-SKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYAL 402
            ....|.:..|.||.|...||||:||...:| |:.|.|...|...:..:.:|:.      ..:.:|
 Worm   358 NVSYDDMTKLKYLDAVVRESLRLYPVAWFACSRECVKPTTLGDIYIDKGVKIE------ADVMSL 416

  Fly   403 HNDPDLYPE-PDVFRPERFLDGGLKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFE 466
            |...:::.| .|.|.|||:|:...::...   ::.||.||||||||||||:.||.|||.:::|::
 Worm   417 HRSKEIWGENADDFVPERWLEPSSRHTMS---WIPFGAGPRQCVGMRLGLSEAKTALAHLLRRYD 478

  Fly   467 VVVSPRT 473
            :|....|
 Worm   479 LVAGVET 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 123/495 (25%)
cyp-13B1NP_510233.1 p450 31..479 CDD:306555 121/489 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28638
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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