DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and cyp-43A1

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_508961.3 Gene:cyp-43A1 / 180838 WormBaseID:WBGene00017108 Length:526 Species:Caenorhabditis elegans


Alignment Length:563 Identity:127/563 - (22%)
Similarity:217/563 - (38%) Gaps:127/563 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLLGIATLLGAIYAFLVSNFGHW---RRRGVTEPRALPLFGSFPNMIWPRQHFTMDMRDIYMHYR 66
            :||.:|..   .|.|| .||..:   .:.|: .|| ..:|| ...::|      :|....:.::.
 Worm     5 ILLPVAIF---TYVFL-RNFKLYYTLHKCGL-NPR-FDIFG-IKGLLW------LDSSAAHENFT 56

  Fly    67 NTHSYVG---CYLLR--APKLLVLEPRLVYEIYVSAFSHFENNDASKMVDIAKDRLVA---LNPF 123
            ...|.:|   ..:||  .|.::.....|::.|....|..|.    |::.:|..|..:.   ::.|
 Worm    57 RMCSMIGDQTFSVLRGATPVVITSNVDLIHAISTEHFDCFH----SRIPEILSDDPITSDNIHMF 117

  Fly   124 VLEGEEWRHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDL--DCIDLGLRFTGE 186
            ..:||.|:..|.:.|..|:..:::.....|.....:....:...|.|...:  ....|....|..
 Worm   118 AAKGERWKRLRTLTSYGLSTVKLKLLFPTMDTCVSEFMDHVNSLSDGQSVVINHSHSLFQNHTSY 182

  Fly   187 SLFDCVLGIQARTFTDNPLPVVRQNHEMSAENRGLAIAGAVHGLFPNLPRWLRPK---VFPRS-- 246
            .|..|..|.:            .:||.:   |..|.:.....|.|..|.:....|   :||.:  
 Worm   183 VLARCAYGHK------------EKNHRV---NNFLGVFSKAFGNFAELQKSTAEKIAYIFPETKL 232

  Fly   247 --HDRFYGQMISEALRLR--------RSKHQER-------------ND-------FINH-----L 276
              .:.|.|..:..|.:.:        .|..|.|             ||       |..|     |
 Worm   233 IFKNSFVGHFLKSATQQKFLDYLLHLISNFQSRKNVDNNNGICCTENDHYSLLGFFFEHHNEKKL 297

  Fly   277 LE----------MQRELDLSEEDMASHAMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEELQ 331
            :|          ::.|..:|.|::.:........|.|||||::......|..|||.|.::| |.:
 Worm   298 IEKAEGQIDMKKVKVEKSISYEEITAQCKFISVAGFDTTSNTLTLLFNFLANNPDVQDKIY-EAE 361

  Fly   332 LVNPGGYLPDLDALIDLPYLSACFNESLRIYP-AGGWASKTCTKEYELRGSHHSEPLKLRPGDHV 395
            :.|....: ..:.:..|..|..|..|:||::| |....::.||:.:::......|.::      :
 Worm   362 IKNQPEQI-SFETVSSLRLLQNCIFETLRLFPHASPLQTRICTEPFKIGKYQFLENVQ------I 419

  Fly   396 MVPIYALHNDPDLY-PEPDVFRPERFLDGGLKNC--KQQGIFLGFGNGPRQCVGMRLGLAMAKAA 457
            :|..:..|:|.::: .:.|.|||.||     :|.  :|:..|:.||.|||||||||..|...|..
 Worm   420 VVNPWGPHHDREIWGNDVDCFRPSRF-----ENLTEQQRKAFMPFGVGPRQCVGMRFALLEMKTT 479

  Fly   458 LAAIVQRFEVVV-SP------RTLNGTELDPLIFVGVHKGGIW 493
            ...::|::.|.. ||      :|:..|..|        .|.||
 Worm   480 AFRMLQKYSVFTNSPVHDRHGKTVRMTVRD--------TGTIW 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 115/522 (22%)
cyp-43A1NP_508961.3 p450 33..495 CDD:299894 111/501 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D467733at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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