DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and cyp-13A10

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_496085.3 Gene:cyp-13A10 / 174522 WormBaseID:WBGene00014254 Length:519 Species:Caenorhabditis elegans


Alignment Length:539 Identity:135/539 - (25%)
Similarity:235/539 - (43%) Gaps:68/539 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLLGIATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFGSFPNMIWPRQHFTMDMRDIYMHYRNTH 69
            :||.|.||.....::.:..:.:|||||:..|...||.||||..:.......:.:||....|...:
 Worm     4 ILLAIPTLFIGFISYYLWIWTYWRRRGIPGPLGYPLVGSFPKTLKSEYPQYLQIRDWTKLYGPIY 68

  Fly    70 SYVGCYLLRAPKLLVLEPRLVYEIYVSAFSHFENNDASKMV-DIAKDRLVALNPFVLEGEEWRHQ 133
            .|....:   ..|:|.:..:|.:|:|..:.:|.....:.:. |..||.  ..|.|..:|..|:..
 Worm    69 GYTEGTI---KTLIVSDIDIVRQIFVEQYDNFYGRKLNPIQGDPEKDE--RTNLFSAQGFRWKRL 128

  Fly   134 RAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTGESLFDCVLGIQAR 198
            ||:.|...:|..:|..:..::...::|.:.|..:::.|:.:|.:.....||.:::....:|....
 Worm   129 RAISSPTFSNNSLRKINVTVEDSAMELLRHIEEQTSEGQQIDMLQFYQEFTMDTIGRIAMGQTDS 193

  Fly   199 TFTDNPLPVVRQNHEMSAENR-GLAIAGAVHGLFPNLPRWLR----------------------- 239
            ....|||  ::....:..:|| .:.:.|   |:||.|.:..|                       
 Worm   194 QMFKNPL--LKFVRAIFGDNRKHIPLIG---GVFPTLAQVFRFFMLKFPLLGAANFIHVNKTVVT 253

  Fly   240 ---PKVFPRSHDRFYGQMISEALRLRRSKHQERNDFINHLLEMQREL---------DLSEEDMAS 292
               .::..|.:||..|..|.|.........:.|.|.:.|..|...:.         .|:.:::..
 Worm   254 AVQNRIDQRENDRKNGIEIGEPQDFIDLFLEARADDVEHFQENNGDFSKTSSYGNRQLTTQEIVG 318

  Fly   293 HAMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEEL--QLVNPGGYLPDLDALIDLPYLSACF 355
            ..:.|:..|.|||:.|:::...||..:|:.|::|.||:  :.:.|.   ...|.|..|.|:....
 Worm   319 QCLVFLIAGFDTTALSLSYTTFLLATHPEVQKKLQEEIERECIEPS---ISFDHLSKLKYMDCII 380

  Fly   356 NESLRIYPAGGWA-SKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYALHNDPDLY-PEPDVFRPE 418
            .|:||:||.|..| |:.|.:..:|..      :::..|..|.|..::||.|..:: .:...|:||
 Worm   381 KETLRLYPLGTMANSRRCMRATKLGN------VEVEVGTMVQVDTWSLHTDTKIWGDDAKEFKPE 439

  Fly   419 RFLDGGLKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFEVVVSPRTLNGTELDPLI 483
            |:||.......|:|.::.||.||||||||||.....|..||.|::::...|..:    ||: ||.
 Worm   440 RWLDPNCDQVFQKGGYISFGLGPRQCVGMRLAYMEEKMLLAHILRKYTFEVGTK----TEI-PLK 499

  Fly   484 FVG---VHKGGIWLQFVPR 499
            .||   .....:|:....|
 Worm   500 LVGRATTQPETVWMHLKQR 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 123/495 (25%)
cyp-13A10NP_496085.3 p450 32..500 CDD:278495 121/491 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28638
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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