DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp28c1 and Cyp3a62

DIOPT Version :10

Sequence 1:NP_572752.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001019403.1 Gene:Cyp3a62 / 170509 RGDID:1595919 Length:497 Species:Rattus norvegicus


Alignment Length:484 Identity:132/484 - (27%)
Similarity:232/484 - (47%) Gaps:62/484 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFGSFPNMIWPRQHFTMDMRDIYMHYRNTHSYVG 73
            :||:|..:|.:..|..|::::.|::.|:.||..|   |::..|..|....|..:..|.:..   |
  Rat    15 LATILVLLYLYGTSTHGNFKKLGISGPKPLPFVG---NILAYRHGFWEFDRHCHKKYGDIW---G 73

  Fly    74 CYLLRAPKLLVLEPRLVYEIYV-SAFSHFENNDASKMVDIAKDRLVALNPFVLEGEEWRHQRAVF 137
            .|..|.|.|.:.:|.::..:.| ..:|.|.|..:.....|.| :.:.|:    |.|||:..|.:.
  Rat    74 FYEGRQPILAITDPDIIKTVLVKECYSTFTNRRSFGPAGILK-KAITLS----EDEEWKRLRTLL 133

  Fly   138 STLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTGESLFDCVLGIQARTFTD 202
            |...|:|:::....|:.:....|.:.:..::..|..:...|:...::.:.:.....|:...:..:
  Rat   134 SPTFTSGKLKEMFPIINQYADLLVKNVKHEAEKGNPITMKDIFGAYSMDVITGTSFGVNVDSLNN 198

  Fly   203 NPLPVVRQNHEMSAEN----RGLAIAGAVHGLFPNLPRWLRP-------KVFPRSHDRFYGQMIS 256
            ...|.|::..::...|    ..|::.     |||    :|.|       .|||:...:|:...:.
  Rat   199 PQNPFVQKVKKLLKFNFLDPFFLSVI-----LFP----FLTPVFEAFDITVFPKDVMKFFRTSVE 254

  Fly   257 EALRLRRSKHQE----RNDFINHLLEMQRELD------LSEEDMASHAMTFMFDGLDTTSNSIAH 311
               |::.::.||    |.||:..::..|...|      |::.::.:.::.|:|.|.:|||::::.
  Rat   255 ---RMKENRMQEKVKQRLDFLQLMINSQSSGDKESHQGLTDVEIVAQSIFFIFAGYETTSSALSF 316

  Fly   312 CLLLLGRNPDCQRRLYEELQLVNPGGYLPDLDALIDLPYLSACFNESLRIYPAGGWASKTCTKEY 376
            .|.||..:||.|::|.:|:....|.......|.|:::.||....||:||::|.||...:.|.|:.
  Rat   317 ALYLLATHPDLQKKLQDEIDAALPNKAPVTYDVLVEMEYLDMVLNETLRLFPVGGRLERVCKKDV 381

  Fly   377 ELRGSHHSEPLKLRPGDHVMVPIYALHNDPDLYPEPDVFRPERFLDGGLKNCKQQG-----IFLG 436
            |:.|      :.:..|..||||.:|||.||..:|||:.|.||||      ..|.|.     |:|.
  Rat   382 EING------VFIPKGTVVMVPTFALHKDPKCWPEPEEFCPERF------RKKNQDSINPYIYLP 434

  Fly   437 FGNGPRQCVGMRLGLAMAKAALAAIVQRF 465
            ||||||.|:|||..|...|.||..::|.|
  Rat   435 FGNGPRNCIGMRFALMNMKIALVRVLQNF 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_572752.1 CYP6-like 67..493 CDD:410679 116/426 (27%)
Cyp3a62NP_001019403.1 CYP3A 67..492 CDD:410743 117/429 (27%)

Return to query results.
Submit another query.