DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and Cyp3a13

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_031845.1 Gene:Cyp3a13 / 13113 MGIID:88610 Length:503 Species:Mus musculus


Alignment Length:482 Identity:135/482 - (28%)
Similarity:223/482 - (46%) Gaps:54/482 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFG---SFPNMIWPRQHFTMDMRDIYMHYRNTHS 70
            :||.|..:|.:...:.|.:::.|:..|:.||..|   ::....|.        .||..|.:....
Mouse    15 LATSLVLLYLYGTHSHGIFKKLGIPGPKPLPFLGTILAYQKGFWE--------CDIQCHKKYGKM 71

  Fly    71 YVGCYLLRAPKLLVLEPRLVYEIYV-SAFSHFENNDASKMVDIAKDRLVALNPFVLEGEEWRHQR 134
            : |.|..|.|.|.:.:|.::..:.| ..:|.|.|......|.|.|..:     .:.|.|||:..|
Mouse    72 W-GLYDGRQPVLAITDPDIIKTVLVKECYSTFTNRRRFGPVGILKKAI-----SISENEEWKRIR 130

  Fly   135 AVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTGESLFDCVLGIQART 199
            |:.|...|:||::....|:.:....|.:.:......||.....|:...::.:.:.....|:...:
Mouse   131 ALLSPTFTSGRLKEMFPIINQFTDVLVRNMRQGLGEGKPTSMKDIFGAYSMDVITATSFGVNIDS 195

  Fly   200 FTDNPLPVVRQNHEMSA----ENRGLAIAGAVHGLFPNL-PRW--LRPKVFPRSHDRFYGQMISE 257
            ..:...|.|.:..::..    :...|::.     |||.| |.:  |...:|||....|:...: |
Mouse   196 LNNPQDPFVEKIKKLLKFDIFDPLFLSVT-----LFPFLTPVFDALNVSLFPRDVISFFTTSV-E 254

  Fly   258 ALRLRRSKHQE--RNDFINHLLEMQR------ELDLSEEDMASHAMTFMFDGLDTTSNSIAHCLL 314
            .::..|.|.:|  |.||:..::..|.      ...||:.::.:.::.|:|.|.:|||::::..|.
Mouse   255 RMKENRMKEKEKQRVDFLQLMINSQNYKTKESHKALSDVEIVAQSVIFIFAGYETTSSALSFALY 319

  Fly   315 LLGRNPDCQRRLYEELQLVNPGGYLPDLDALIDLPYLSACFNESLRIYPAGGWASKTCTKEYELR 379
            ||..:||.|::|.:|:....|.......|.|:.:.||....||:||:||..|...:.|..:.|:.
Mouse   320 LLAIHPDVQKKLQDEIDAALPNKAPATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEIN 384

  Fly   380 GSHHSEPLKLRPGDHVMVPIYALHNDPDLYPEPDVFRPERFLDGGLKNCKQQGI----FLGFGNG 440
            |      |.:..|..||:|.:|||.||..:|||:.||||||   ..||  |..|    :|.||:|
Mouse   385 G------LFIPKGTVVMIPTFALHKDPKYWPEPEEFRPERF---SKKN--QDSINPYMYLPFGSG 438

  Fly   441 PRQCVGMRLGLAMAKAALAAIVQRFEV 467
            ||.|:|||..|...|.||..::|.|.|
Mouse   439 PRNCIGMRFALINMKVALVRVLQNFTV 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 129/456 (28%)
Cyp3a13NP_031845.1 p450 39..491 CDD:365848 129/458 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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