DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and LOC100495359

DIOPT Version :10

Sequence 1:NP_572752.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:XP_002933808.1 Gene:LOC100495359 / 100495359 XenbaseID:XB-GENE-29082671 Length:505 Species:Xenopus tropicalis


Alignment Length:546 Identity:124/546 - (22%)
Similarity:210/546 - (38%) Gaps:136/546 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLLGIATLLGAIYAFLVSNFGHWRR--RGVTEPRALPLFGSFPNMIWPRQHFTMD-------MRD 60
            |.|||..:|..:....|.....||.  .|   |..:|..|   ||      |.:|       ...
 Frog    17 LTLGIIFILSLLLLDFVKRRKTWRNFPPG---PPCIPFVG---NM------FQIDASCANNSYNK 69

  Fly    61 IYMHYRNTHSYVGCYLLRAPKLLVLEPRLVYEIYVSAFSHFENNDASKMVDIA-KDRLVALNPFV 124
            :...|.:..|...|:    ..::||..   :|:...|.  |:.::     ||| :.|......|.
 Frog    70 LSKKYGDVFSLQICW----QNIVVLNG---FEVIKEAL--FQKSE-----DIADRPRFPLYESFG 120

  Fly   125 LE-----------GEEWRHQRAV-FSTLLTNGRIRTTHAIMQRVCLD---LCQFIAIKSAGG--- 171
            |.           |:.|:.||.. .|||...|..:  .::.:||..:   ||.  |.:|..|   
 Frog   121 LTGNSKGVLLAHYGQGWKEQRRFSLSTLRDFGMGK--KSLEERVTEEAGFLCS--AFESEQGCSF 181

  Fly   172 ----------KDLDC-IDLGLRFT-GESLFDCVLGIQARTFTDNPLPVVRQNHEMSAENRGLA-I 223
                      .::.| |..|.||. .:..:..:|.:...|              :.||:..|| |
 Frog   182 NPQYYINTAVSNIICSIVFGDRFEYDDERYQKLLRLLEAT--------------LKAESGPLAQI 232

  Fly   224 AGAVHGL--FPNLPRWLRPKVF-PRSHDRFYG---QMISEALRLRRSKHQE------RNDFIN-H 275
            ..||..|  .|.|.:    |:| |:.|  |:.   :.::|        |::      :.|.|: .
 Frog   233 VTAVPSLSKIPGLSK----KIFQPQIH--FFAYLEEFVNE--------HRKTWDPGYKRDLIDAF 283

  Fly   276 LLEMQ-----RELDLSEEDMASHAMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEELQLVNP 335
            ||||:     :|...:|.::....:.....|.:||:.::...||.:...|:.|:::.||:..|..
 Frog   284 LLEMEKAKEDKETSFNENNLLFTPVDLFSAGTETTTTTLRWALLYMLLYPEVQKKVQEEIDEVIG 348

  Fly   336 GGYLPDLDALIDLPYLSACFNESLR---IYPAGGWASKTCTKEYELRGSHHSEPLKLRPGDHVMV 397
            ....|.:..::.:||.:|..:|..|   :.|.  .......::.|::|..      :..|..||:
 Frog   349 RNRKPAMLDILKMPYTNAVIHEIQRCGDVLPV--TLPHMAYRDTEIQGYF------IPKGIVVMI 405

  Fly   398 PIYALHNDPDLYPEPDVFRPERFLDGGLKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIV 462
            .:.::..|..::.:|..|.||.|||...|..|::. |:.|..|.|.|||.:|............:
 Frog   406 NLSSVLKDERVWEKPHQFYPEHFLDEEGKFVKREA-FVPFSAGRRSCVGEQLARMELFLFFTTFL 469

  Fly   463 QRFEVVV---SPRTLNGTELDPLIFV 485
            |.|..::   .||    .:.||:..|
 Frog   470 QTFTFLIPDNEPR----PQTDPVFAV 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_572752.1 CYP6-like 67..493 CDD:410679 107/475 (23%)
LOC100495359XP_002933808.1 cytochrome_P450 74..498 CDD:477761 108/477 (23%)

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