DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and LOC100487846

DIOPT Version :10

Sequence 1:NP_572752.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:XP_017950484.2 Gene:LOC100487846 / 100487846 XenbaseID:XB-GENE-29078943 Length:512 Species:Xenopus tropicalis


Alignment Length:552 Identity:143/552 - (25%)
Similarity:241/552 - (43%) Gaps:105/552 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SLLLGIATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFGSFPNMIWPRQHFTM--DMRDIYMHYR 66
            :||:.:.||| |.||  :..:..::|.|:..|..:|..|:|..    .:|..|  ||: .:..|.
 Frog    13 TLLVLLLTLL-AYYA--IWPYRLFKRYGIPGPTPIPFIGTFLG----NRHGLMEFDMK-CFKKYG 69

  Fly    67 NTHSYVGCYLLRAPKLLVLEPRLVYEIYV-SAFSHFEN-------NDASKMVDIAKDRLVALNPF 123
            |..   |.|....|.|.:|:|.::..|.| ..:::|.|       ......|.::||        
 Frog    70 NVW---GFYDGPQPVLAILDPVIIKSIMVKECYTNFTNRRDFGLSGPLKSSVLMSKD-------- 123

  Fly   124 VLEGEEWRHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTGESL 188
                |:|:..|.|.|...|:|:::....:|:.....|.:.|..|....:.||...:    .|...
 Frog   124 ----EQWKRIRTVLSPTFTSGKLKQMFPLMKHYGELLVKNIHKKIDNKEPLDMKSI----FGSYS 180

  Fly   189 FDCVLGIQARTFTDNPLPVVRQNHEMSAENRGLAIAGAVHGLF----------PNLPR----WLR 239
            .|.:|   :.:|:.|...:...|.......|.|........||          |.|.:    :|.
 Frog   181 MDTIL---STSFSVNVDSMNNPNDPFVTNARNLFTFSFFKPLFLITILCPFLVPFLDKMNFCFLS 242

  Fly   240 PKVFPRSHDRFYGQMISEALRLRRSK--HQERNDFINHLLEMQ-------------RELDLSEED 289
            .|..     :|:...:: :::.:|.|  |.:|.||:..:::.|             |..:||:.:
 Frog   243 SKFL-----KFFKDAVA-SIKKKRQKGAHMDRVDFLQLMVDAQSNEGESVPEEEKHRHKELSDTE 301

  Fly   290 MASHAMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEELQLVNPGGYLPDLDALIDLPYLSAC 354
            :.:.::.|:..|.:|||.::......:.|.||.||:|.||:..:.|....|..|||:.:.|:...
 Frog   302 ILAQSLIFIMAGYETTSTTLMFLTYNIARYPDVQRKLEEEINTLLPNKAPPTYDALMKMEYMDMV 366

  Fly   355 FNESLRIYPAGGWASKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYALHNDPDLYPEPDVFRPER 419
            .||:||:.|......:.|.|..|:.|      :.:..|..::||::|||.:|:::|||:.|:|||
 Frog   367 INETLRLLPPAIRIDRVCKKTMEING------VTIPAGVVIVVPLFALHLNPEIWPEPEEFQPER 425

  Fly   420 FLDGGLKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFEV-----------VVSPRT 473
            |.....|| :....||.||.|||.|:|||..|...|.||..::|.|::           |.:...
 Frog   426 FSKENQKN-QDPYNFLPFGVGPRNCIGMRFALVNIKLALTILLQNFKLETCKDTPVPLKVCTRGN 489

  Fly   474 LNGTELDPLIFVGVHKGGIWLQFVPRKNVTTK 505
            |..|:  |:|          |..||:...||:
 Frog   490 LKPTK--PII----------LNLVPKGAQTTE 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_572752.1 CYP6-like 67..493 CDD:410679 119/473 (25%)
LOC100487846XP_017950484.2 cytochrome_P450 67..498 CDD:477761 120/477 (25%)

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