DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp28c1 and tbxas1

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:XP_031753608.1 Gene:tbxas1 / 100327243 XenbaseID:XB-GENE-994325 Length:532 Species:Xenopus tropicalis


Alignment Length:556 Identity:136/556 - (24%)
Similarity:238/556 - (42%) Gaps:107/556 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFGSFPNMIWPRQHFTMDMRDIYMHYRNTHSYV- 72
            :|..||.:|.:.||.|....:.|:..|:.||..|:.  |::.:..:..|     .|...|:..: 
 Frog    19 VAGFLGLLYWYSVSAFWQLEKAGIKHPKPLPFIGNI--MLFQKGFWEGD-----RHLLKTYGPIC 76

  Fly    73 GCYLLRAPKLLVLEPRLVYEIYVSAFSHFEN-----NDASKMVDIAKDRLVALNPFVLEGEEWRH 132
            |.|:.|.|.:::.||..:.::....|.:|.|     |..:|.:   .|.|:.     |..::|:.
 Frog    77 GYYMGRRPMIVIAEPDAIKQVLQKDFVNFTNRMQRLNLVTKPM---SDSLLC-----LRDDKWKR 133

  Fly   133 QRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTGESLFDCVLGIQA 197
            .|:|.:...:..|::....::.:.|..|.:.:...::.|:..:.......||.:.:.....|.|.
 Frog   134 VRSVLTPSFSAARMKEMCPLINQCCDVLVENLMEYASSGEACNVQRCYACFTMDVVASVAFGTQV 198

  Fly   198 RTFTDNPLPVVRQNHEMSAENRGLAIAGAVHGLF-PNLPRWLRPKVFP------------RSHDR 249
            .:..|:..|:| ||.:...|            || |..|..|....||            :..||
 Frog   199 DSQRDSDHPLV-QNCKRFLE------------LFTPFKPVVLLCLAFPSIMIPIARRLPNKHRDR 250

  Fly   250 ---FYGQMISEALRLRRSK--HQERNDFINHLLEMQ--------------RELDLS--------- 286
               |:.::|.:.:..|.::  ::.|.||:..:|:.:              .:.|||         
 Frog   251 INSFFLKVIRDIIAFRENQPPNERRRDFLQLMLDARDSAGHVSVDHFDIVNQADLSVPQNQDRGQ 315

  Fly   287 ------------EEDMASHAMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEELQLVNPGGYL 339
                        ||::...|..|:..|.:||.:.::....||..:||||.:|.:|:...:.....
 Frog   316 DPPRKSTQKTLNEEEILGQAFIFLIAGYETTCSLLSFASYLLATHPDCQEKLLKEVDEFSQEHEE 380

  Fly   340 PDLDALIDLPYLSACFNESLRIYPAGGWASKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYALHN 404
            .|.:.:.||||:....||:||:||.....::...::..:.|      |.:..|..|.:||..|.|
 Frog   381 ADYNTVHDLPYMEMVINETLRMYPPAYRFAREAARDCTVMG------LGIPAGAVVEIPIGCLQN 439

  Fly   405 DPDLYPEPDVFRPERFLDGGLKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRF---- 465
            ||..:.||:.|.|||| ....|..:...:||.||.|||.|:||||.|..||..|..::::|    
 Frog   440 DPRFWHEPEKFNPERF-TAEEKQKRHPFLFLPFGAGPRSCIGMRLALLEAKITLYRVLRKFRFQT 503

  Fly   466 -EVVVSPRTLNG-TELDPLIFVGVHKGGIWLQFVPR 499
             ::...|..|:. |.|.|       |.|::::.|.|
 Frog   504 CDLTQIPLQLSAMTTLRP-------KDGVYVRVVAR 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 124/516 (24%)
tbxas1XP_031753608.1 cytochrome_P450 71..526 CDD:425388 119/489 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.