DRSC/TRiP Functional Genomics Resources

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Protein Alignment rudhira and bcas3

DIOPT Version :9

Sequence 1:NP_001368979.1 Gene:rudhira / 32136 FlyBaseID:FBgn0266019 Length:2162 Species:Drosophila melanogaster
Sequence 2:XP_021337035.1 Gene:bcas3 / 393594 ZFINID:ZDB-GENE-040426-1257 Length:925 Species:Danio rerio


Alignment Length:1051 Identity:365/1051 - (34%)
Similarity:499/1051 - (47%) Gaps:243/1051 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSADSPRRHPSGVVGSGIGLGSGSGTGLGSGSTGGSKSGAAVPAIVPPQTVSDRSILDSAIGFIN 65
            |::||||| ||...|.                           .:|..|..:::|.::|.:.|:.
Zfish     1 MASDSPRR-PSRCAGG---------------------------VVVRAQAATEQSYMESVVTFLQ 37

  Fly    66 DV---TLANQPVQDPKDTITWARFETCADVSD----PRFGDDWELEGNAAPPLLLILGYGLGVQV 123
            ||   .....|..|.|:.|.|.|||. .|::|    |.| .:....|| .|||.|::||..|:|:
Zfish    38 DVVPQAYTGAPPNDEKEKIVWVRFEK-TDINDVARLPEF-QEMHSSGN-DPPLCLMIGYADGMQI 99

  Fly   124 WAIPANGEAVEVLSWRHGVVTALRVLPTPATAAALDENGRADEPVDSFAEKRPLVAFVDGGSAAA 188
            |:|..||||.|:.|.|||.|...|:||.|..::.         ..|||||||||:          
Zfish   100 WSISLNGEAQELFSVRHGPVRTARILPAPHISSL---------NTDSFAEKRPLL---------- 145

  Fly   189 SGLLAGSSGLGLGGGGGGVTTVGGSVGGVSGIGVSASAQFSAVNFMSLKTGVQVKTIKFKNAVLD 253
                             ||....||.|        .|..:..|:..||:||..||:|:||..:.|
Zfish   146 -----------------GVCKSTGSSG--------TSPPYCCVDLYSLRTGEMVKSIQFKTPIYD 185

  Fly   254 IQANRSAVVITFHERIAVFDARTLEDRLTITTCYPSPGINPNPIALGPRWLAYAEHKLLHSKRSG 318
            :..|:..:|::..|:||.||:.|...:..:|:|||.||.|.||||||.|||||||:||:...:|.
Zfish   186 LHCNKRILVVSLQEKIAAFDSCTFMKKFFVTSCYPCPGPNFNPIALGSRWLAYAENKLIRCHQSR 250

  Fly   319 GGCDGEGVPSYTATVLNAAKSLSKGLREFGEQVAAGLTGTTAGSGASSKSSSFDSASGGPDAKQS 383
            ||..|:...||||||::|||:|..||...| :|...|.||........:.::.......|  .|.
Zfish   251 GGACGDNAQSYTATVISAAKTLKTGLTMVG-KVVTQLAGTLPSGVPDEEGTAHSGTRRSP--HQP 312

  Fly   384 GVVTIIDVKHPVKDYSPTSGTPLSSTAGSQGGGDPIVAHFVAHSEALVAMEFDSSGMLLLTADRR 448
            |||||||. |.|.:     |..|.|   ....|:.::|||.||.:.:..|.|:.|||||:|||..
Zfish   313 GVVTIIDT-HTVGE-----GQVLVS---EDSDGEGLIAHFPAHDKPISCMAFNPSGMLLVTADTL 368

  Fly   449 GHDFHVFRVQPHPVGPSLAAVHHLYVLHRGDTSAKVQHIAFSLDSRWAAVSTLRGTTHVFPITPY 513
            |||||||::..||...|.:||||||.||||:|.||||.|.||.|.||..:||||||:|||||.||
Zfish   369 GHDFHVFQILTHPWASSQSAVHHLYTLHRGETEAKVQDICFSHDCRWVVISTLRGTSHVFPINPY 433

  Fly   514 GGAMGVRTHTSLHVVNKLSRFHRSAGL--------GADGRSSSPISHSESTTFVQSLQPYH---- 566
            |||...|||.|..|||::|||.:||||        ...|...|||....|:   .|..|.|    
Zfish   434 GGAPCARTHMSPRVVNRMSRFQKSAGLEEIEQELSSKQGGRCSPIPGLSSS---PSGSPLHAKLT 495

  Fly   567 --------------NPTLPPYPRPSVVQPLAQLRQPFTLGSPPGSAGLGGGVGGGGVMGSGVSAG 617
                          ||.|...|..:||.||||::||.|||:.....       |..:.|:|.   
Zfish   496 SQESFNNFTNNNMGNPRLSSLPSLTVVLPLAQIKQPMTLGTITKRT-------GPYLFGAGC--- 550

  Fly   618 GHGVGVGVGSNSQRQRQRLSSLSDDSGKPLSVCSIFAKSRSWLLEPPMATREQPHRVQRKAVDSL 682
                 ..:.:..:.:.....|.|..||....|.::||.||||.:..|...||: .:.::..|:||
Zfish   551 -----FSIKTPCKAKPPPQISPSKSSGGEFCVAAVFASSRSWFITNPNIKREK-DQSRQAVVESL 609

  Fly   683 FVMAGHGALIQYDLDTKLASHVAKEKICDDTPIELEVEARAQWNLGRRKDGSQEIAPPLGLDNWL 747
            ::::.:|.|:::.|:.:..|  ..:||.||||:||....||.|||.|....: |:.||...::.|
Zfish   610 YILSCYGNLVEHVLEPRPIS--TAQKISDDTPLELNTCPRACWNLARTPQWN-ELQPPFNSNHPL 671

  Fly   748 I---------------------------KDRHASLLLDSANQFDDPDERTESWLAQVEIITHAGP 785
            :                           .:.:.||..|.:.|.|      |.||:||||:||.||
Zfish   672 VLASDFVQYYQYLLAGLVPPGSPGPITRHESYDSLASDHSGQED------EEWLSQVEIVTHTGP 730

  Fly   786 HRRLWMGPQFVFKNYNTPSGSNLNHVDAEAVEIGVSKTTTTTLPSTAASSA-----------LGL 839
            ||||||||||.||..: |||           :..|..::::.|.|...|..           |.|
Zfish   731 HRRLWMGPQFQFKTIH-PSG-----------QTTVISSSSSVLQSQGPSDTQQPLLDFDTDDLDL 783

  Fly   840 GTI-IGKDRSSPLNMPLSAATSVGGAGIGSS-AVTGRSGAGVPVLIESGSYSSIEQSPKLM---- 898
            .:: |...||.|::||            ||| .|..|.|..  .:|::|| ...::|..|:    
Zfish   784 HSLRIQPVRSEPVSMP------------GSSRLVADRRGQS--TVIDTGS-GMFDRSVTLLEVCG 833

  Fly   899 ---DRFRHGHLDS----DYGHGDTRLKEDLADAMRESPS-------TAAARRETTAASVDQAAPP 949
               :.|...|:.|    :.|     |||.|||||.||||       ||..:||   .|::..:..
Zfish   834 SWPESFGLRHMPSVEATEEG-----LKERLADAMSESPSRDIVGSGTAELQRE---GSIETLSNS 890

  Fly   950 CGDHLATGASP 960
            .|.  .:|:.|
Zfish   891 SGS--TSGSIP 899

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rudhiraNP_001368979.1 BCAS3 648..818 CDD:403626 66/196 (34%)
bcas3XP_021337035.1 WD40 339..374 CDD:197651 19/34 (56%)
BCAS3 517..749 CDD:315211 83/257 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579762
Domainoid 1 1.000 354 1.000 Domainoid score I956
eggNOG 1 0.900 - - E1_KOG2109
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9778
Inparanoid 1 1.050 469 1.000 Inparanoid score I1489
OMA 1 1.010 - - QHG52689
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005577
OrthoInspector 1 1.000 - - oto39108
orthoMCL 1 0.900 - - OOG6_105557
Panther 1 1.100 - - LDO PTHR13268
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3991
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.760

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