DRSC/TRiP Functional Genomics Resources

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Protein Alignment rudhira and F56C9.10

DIOPT Version :9

Sequence 1:NP_001368979.1 Gene:rudhira / 32136 FlyBaseID:FBgn0266019 Length:2162 Species:Drosophila melanogaster
Sequence 2:NP_001360482.1 Gene:F56C9.10 / 176040 WormBaseID:WBGene00018953 Length:1035 Species:Caenorhabditis elegans


Alignment Length:1042 Identity:261/1042 - (25%)
Similarity:401/1042 - (38%) Gaps:272/1042 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 AVPAIVP--------PQT-----VSDRSILDSAIGFINDVTLANQPV----------QDPKDTIT 82
            :.|..:|        |:|     :..:.:..||   :...|||||.|          |.....||
 Worm   165 SAPPPIPSMNTIMTKPRTNSVSYIKGQVVRQSA---VEQQTLANQVVDLVAMGMSKGQTQSSQIT 226

  Fly    83 -----WARFETCADVSDPRFGDDWELEGNAAPPLLLILGYGLGVQVWAI----PANGEAVEVLSW 138
                 |.:..:.....:|    :..||       :||:|...|.|:|.:    ..:||..||||.
 Worm   227 AEKAEWVQLTSVEKAGEP----NERLE-------VLIVGLCRGYQIWTMSMEFQQSGEFEEVLSE 280

  Fly   139 RHGVVTALRVLPTPATAAALDENGRADEPVDSFAEKRPLVAFVDGGSAAASGLLAGSSGLGLGGG 203
            |.|.|.||:|||         .|.:.....||||:.|||:|.||..|.                 
 Worm   281 RQGPVRALKVLP---------NNLKLRGKKDSFADSRPLIAMVDASSH----------------- 319

  Fly   204 GGGVTTVGGSVGGVSGIGVSASAQFSAVNFMSLKTGVQVKTIKFKNAVLDIQANRSAVVITFHER 268
                               ....|:.:|..:||.||.:|..|||:..|..:..:...:|::....
 Worm   320 -------------------HPDRQYCSVTIISLLTGREVHKIKFEEPVCAVNVSDQFLVVSLANM 365

  Fly   269 IAVFDARTLEDRLTITTCYPSPGINPNPIALGPRWLAYAEHKLLHSKRSGGGCDGE----GVPSY 329
            ...:|..|..:..||.|. ||...:|..::|..:.||||:..|..:.:|.||...|    ....|
 Worm   366 AYAYDILTFNEVRTIRTA-PSCENSPPALSLSCQLLAYADTSLDLNLQSSGGLAAEVEATSSEKY 429

  Fly   330 TATVLNAAKSLSKGLREFGEQVAAGLTGTTAGSGASSKSSSFDSASGGPDAKQSGVVTIIDVKHP 394
            |..:..|....|:.::...|.|.       ||||:|:|::           :..||:|::::...
 Worm   430 TDHIYTAMSYFSRSVKTISESVG-------AGSGSSTKAN-----------QPQGVITVLNLAVS 476

  Fly   395 VKDYSPTSGTPLSSTAGSQGGGDPIVAHFVAHSEALVAMEFDSSGMLLLTADRRGHDFHVFRVQP 459
            .:|.|                 |.::.|:|||.:.:..:.|.....|:|:||...:.|::|.:.|
 Worm   477 GEDES-----------------DGVMCHYVAHVDPISYIAFSPDQRLVLSADANANVFNIFLLMP 524

  Fly   460 HPVGPSLAAVHHLYVLHRGDTSAKVQHIAFSLDSRWAAVSTLRGTTHVFPITPYGGAMGVRTHTS 524
            |....|||||.|||.|:||.|.|||...|||.|.||.|::|...|||||.:.|:||....|||..
 Worm   525 HATSSSLAAVQHLYKLNRGSTPAKVVSTAFSEDCRWLAITTNHATTHVFAVCPFGGKPNQRTHGD 589

  Fly   525 LHVVNKLSRFHRSAGL--GADGRSS-SPISH---SESTTFVQSLQP--YHNPTLP---------P 572
            . .|||.|||||||||  .||..:| .|..|   ::|.::.:. .|  .::|||.         |
 Worm   590 T-FVNKESRFHRSAGLTDAADVTASIGPSKHRAMADSCSYTKE-HPIAVNSPTLAKTNGNSRVGP 652

  Fly   573 YPRPSVVQPLAQLRQP-FTLGSPPGSAGLGGGVGGGGVMGSGVSAGGHGVGVGVGSNSQRQRQRL 636
            :|.|.::....:::.. :|.......|             :.:::..:.......|.:...|:||
 Worm   653 FPPPLLLVATEKIKDSRYTKEDLSAWA-------------ADMTSFSYPAAQASSSPAVAARRRL 704

  Fly   637 SSLSDDSGKPLSVCSIFAKSRSWLLEPPMATREQPHRVQRKAVDSLFVMAGHGALI-QYDLDTKL 700
            .         :|..|:..:.:|:.......|.:....:...::....|....|.:: |:|:.:  
 Worm   705 E---------VSRMSVMFRMKSYNSTTSTKTAKTTKMLMSMSLVIAKVDPAQGVIVTQHDIKS-- 758

  Fly   701 ASHVAKEKICDDTPIELEVEARAQ--------WNLGRRKDGSQEIAP-PLGLDNWLIKDRHASLL 756
               :.||.       |..:||..|        |.|.|.|:.:...|| |           .||.|
 Worm   759 ---LRKEG-------ETNMEASPQISVAPVGGWILQRTKNNADMHAPMP-----------SASPL 802

  Fly   757 LDSANQFDDPDER---TESWLAQVEIITHAGPHRRLWMGPQFVFKNY---NTPS-------GSNL 808
            :..|.....|.:|   .:.|...||..|:..|||.:|.||||....|   :.||       |||.
 Worm   803 MAFATVETVPAKRIGDEDVWTPHVETRTYLPPHRWIWQGPQFELFEYREDDQPSLMSPGNKGSNA 867

  Fly   809 NH------VDAEAVEIGVSKTTTTTLPSTAASSALGLGTIIGKDRSSPLNMPLSAATSVGGAGIG 867
            :.      |.:|||.|     |..|:|:.|.....|                  :.||.....|.
 Worm   868 SFKSIPVLVGSEAVNI-----TMKTIPADATRIECG------------------SYTSANSYSID 909

  Fly   868 SSAVTGRSGAGVPVLIESGSYSSI---EQSPKLMDRFRHGHLDSDYGHGDTRLKEDLADAMRESP 929
                   .|:..||:   |.|||.   :....:.|..|....|.|.....:...:||.:...::.
 Worm   910 -------QGSDQPVI---GGYSSATNGDYIASIADAMRDISSDDDSTKKKSPKNDDLIEEFFDTE 964

  Fly   930 STAAARRETTAASVDQAA-----------PPCGDHLATGASPASADLLAAGAGGSASSNCDNVCY 983
            |:....|..:.:|....|           ||....|.|.::.:|........|...|.:.|:...
 Worm   965 SSTPFARNGSGSSSSTGATGGKSLKKKKTPPASAPLPTSSTKSSQKDKKVQNGRERSKDSDDFGT 1029

  Fly   984 YD 985
            :|
 Worm  1030 FD 1031

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rudhiraNP_001368979.1 BCAS3 648..818 CDD:403626 49/198 (25%)
F56C9.10NP_001360482.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158867
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 194 1.000 Inparanoid score I2534
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52689
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005577
OrthoInspector 1 1.000 - - oto17263
orthoMCL 1 0.900 - - OOG6_105557
Panther 1 1.100 - - LDO PTHR13268
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3339
SonicParanoid 1 1.000 - - X3991
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.930

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