DRSC/TRiP Functional Genomics Resources

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Protein Alignment rudhira and bcas3

DIOPT Version :10

Sequence 1:NP_001368979.1 Gene:rudhira / 32136 FlyBaseID:FBgn0266019 Length:2162 Species:Drosophila melanogaster
Sequence 2:XP_031752809.1 Gene:bcas3 / 100487875 XenbaseID:XB-GENE-6050317 Length:924 Species:Xenopus tropicalis


Alignment Length:1057 Identity:363/1057 - (34%)
Similarity:501/1057 - (47%) Gaps:248/1057 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSADSPRRHPSGVVGSGIGLGSGSGTGLGSGSTGGSKSGAAVPAIVPPQTVSDRSILDSAIGFIN 65
            |:.:||||                    .|..|||        .:|.||.|:::|.::|.:.|:.
 Frog     1 MTTESPRR--------------------PSRCTGG--------VVVRPQAVTEQSYMESVVTFLQ 37

  Fly    66 DV---TLANQPVQDPKDTITWARFETCADVSDP-RFGDDWELE--GNAAPPLLLILGYGLGVQVW 124
            ||   ..:..|..:.|:.|.|.|||. ||::|. |..:..|:.  || .|||||::||..|:|:|
 Frog    38 DVVPQAYSGSPTTEEKEKIVWVRFED-ADLNDAYRNMEFHEMHSTGN-DPPLLLMIGYTDGMQIW 100

  Fly   125 AIPANGEAVEVLSWRHGVVTALRVLPTPATAAALDENGRADEPVDSFAEKRPLVAFVDGGSAAAS 189
            :||.:|||.|:.|.|||.|...||||.|...:.:         .|||:|||||:           
 Frog   101 SIPVSGEAQELFSARHGSVRCARVLPCPLFGSQM---------CDSFSEKRPLL----------- 145

  Fly   190 GLLAGSSGLGLGGGGGGVTTVGGSVGGVSGIGVSASAQFSAVNFMSLKTGVQVKTIKFKNAVLDI 254
                            |:....||.|        .|..:..|:..||:||..||:|:||..:.|:
 Frog   146 ----------------GMCKSTGSCG--------TSQPYCCVDLYSLRTGEMVKSIQFKTPIYDL 186

  Fly   255 QANRSAVVITFHERIAVFDARTLEDRLTITTCYPSPGINPNPIALGPRWLAYAEHKLLHSKRSGG 319
            ..|:..:|:...|:||.||:.|...:..:|:|||.||.|.||||||.|||||:|:||:...:|.|
 Frog   187 HCNKRVLVVVLQEKIAAFDSCTFTKKFFVTSCYPCPGPNMNPIALGSRWLAYSENKLIRCHQSRG 251

  Fly   320 GCDGEGVPSYTATVLNAAKSLSKGLREFGEQVAAGLTGTTAGSGASSKSSSFDSASGGPDAKQSG 384
            |..|:.:.||||||:||||:|..||...| :|...||||...........:..:|...|..  .|
 Frog   252 GACGDNIQSYTATVINAAKTLKTGLTMVG-KVVTQLTGTLPAGTPDEDQPTHSNARRSPFV--PG 313

  Fly   385 VVTIIDVKHPVKDYSPTSGTPLSSTAGSQGGGDPIVAHFVAHSEALVAMEFDSSGMLLLTADRRG 449
            |:||||.:...|      |..|.|   .:..|:.|||||.||.:.:..|.|:.|||:|:|:|..|
 Frog   314 VITIIDTETVPK------GQVLVS---EESDGEGIVAHFPAHEKPICCMAFNPSGMMLVTSDTLG 369

  Fly   450 HDFHVFRVQPHPVGPSLAAVHHLYVLHRGDTSAKVQHIAFSLDSRWAAVSTLRGTTHVFPITPYG 514
            ||||||::..||...|.:||||||.||||:|.||||.|.||.|.||..|||||||:|||||.|||
 Frog   370 HDFHVFQILTHPWSSSQSAVHHLYTLHRGETEAKVQDICFSHDCRWVVVSTLRGTSHVFPINPYG 434

  Fly   515 GAMGVRTHTSLHVVNKLSRFHRSAGL----------------GADGRSSSPISHSESTTFVQSLQ 563
            |...||||||..|||::|||.:||||                ...|.|||| |.|.....:.|..
 Frog   435 GQPCVRTHTSPRVVNRMSRFQKSAGLEEIEQELTSKQGGRCSPVPGLSSSP-SGSPLHGKLNSQD 498

  Fly   564 PYH--------NPTLPPYPRPSVVQPLAQLRQPFTLGSPPGSAGLGGGVGGGGVMGSGVSAGGHG 620
            .|:        ||.|.|.|...|||||.|::||.|||:.....       |..:.|:|.      
 Frog   499 SYNNFINNNPGNPRLSPLPSLIVVQPLVQIKQPMTLGTITKRT-------GPYLFGAGC------ 550

  Fly   621 VGVGVGSNSQRQRQRLSSLSDDSGKPLSVCSIFAKSRSWLLEPPMATREQPHRVQRKAVDSLFVM 685
              ..:.:..:.:.....|.|..:|....|.::|..||||........|::....| ..|:||:::
 Frog   551 --FSIKAPCKAKPAPQISPSKSTGGEFCVAAVFGSSRSWFASNQSIKRDKDQSKQ-CIVESLYII 612

  Fly   686 AGHGALIQYDLDTKLASHVAKEKICDDTPIELEVEARAQWNLGRRKDGSQEIAPPLGLDNWLIK- 749
            :.:|.|:::.|:.:.:|...  ||.||||:|:....||.|.|.|....: |:.||...::.|:. 
 Frog   613 SCYGTLVEHFLEPRPSSTAL--KINDDTPLEMWTSPRASWTLVRTPQWN-ELQPPFYANHPLLLA 674

  Fly   750 -----------------------DRHA---SLLLDSANQFDDPDERTESWLAQVEIITHAGPHRR 788
                                   .||.   ||..|.:.|.|      |.||:||||:||.|||||
 Frog   675 ADVVQYYQYLLAGLVPPGSPGPITRHGSYDSLASDHSGQED------EEWLSQVEIVTHTGPHRR 733

  Fly   789 LWMGPQFVFKNYNTPSGSNLNHVDAEAVEIGVSKTTTTTLPSTAA------------------SS 835
            |||||||.||..: |||.                  ||.:.|:::                  :.
 Frog   734 LWMGPQFQFKTIH-PSGQ------------------TTVISSSSSVLHSHGPNDTPQPLLEFDTD 779

  Fly   836 ALGLGTI-IGKDRSSPLNMPLSAATSVGGAGIGS-SAVTGRSGAGVPVLIESGSYSSIEQSPKLM 898
            .|.|.:: |...||.|::||            || ..|:.|.|....:...||:|   ::|..|:
 Frog   780 DLALNSLRIQPVRSEPVSMP------------GSPRPVSDRRGTSTVIDATSGAY---DRSVTLL 829

  Fly   899 D---------RFRH-GHLDSDYGHGDTRLKEDLADAMRESP------STAAARRETTAASVDQAA 947
            :         ..|| ..::|.    |..|:|.|||||.|||      |....||:   .|::..:
 Frog   830 EVCGSWPESSGLRHISSIEST----DEGLRERLADAMSESPNRDVVGSGTELRRD---GSIETLS 887

  Fly   948 PPCGDHLATGASPASAD 964
            ...|.  .:|:.|.:.|
 Frog   888 NSSGS--TSGSIPRNFD 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rudhiraNP_001368979.1 BCAS3 635..818 CDD:463605 67/209 (32%)
bcas3XP_031752809.1 WD40 340..>445 CDD:475233 66/104 (63%)
WD40 repeat 350..397 CDD:293791 25/46 (54%)
WD40 repeat 405..443 CDD:293791 26/37 (70%)
BCAS3 577..749 CDD:463605 62/182 (34%)

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