DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sparc and Fs

DIOPT Version :9

Sequence 1:NP_001001942.1 Gene:sparc / 321357 ZFINID:ZDB-GENE-030131-9 Length:291 Species:Danio rerio
Sequence 2:NP_652376.2 Gene:Fs / 2768836 FlyBaseID:FBgn0259878 Length:767 Species:Drosophila melanogaster


Alignment Length:100 Identity:29/100 - (28%)
Similarity:42/100 - (42%) Gaps:16/100 - (16%)


- Green bases have known domain annotations that are detailed below.


Zfish    48 IEVVEDVIAENPCLNHHCKKGKVCEVDDSNQPMCV-CQDPLTCP--------APIGDFEHVCGTN 103
            :||......:|.|...||..|..|..|....|.|: |:  :.||        :...:.:.|||.:
  Fly   596 LEVAYRGHCKNSCSGVHCLNGLTCVEDQYLMPHCIACR--IECPWDNLDVDSSGYDERQAVCGVD 658

Zfish   104 NKTYESSCHFFATKCSLEGTKKGHKLHIDYIGPCK 138
            .|||.|:|......|     |.|..:.:.|.|||:
  Fly   659 GKTYRSACDINRMIC-----KIGRSIAVAYPGPCR 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sparcNP_001001942.1 FSL_SPARC 59..140 CDD:238649 26/88 (30%)
SPARC_EC 142..289 CDD:238155
SPARC_Ca_bdg 142..275 CDD:287550
FsNP_652376.2 KAZAL 564..604 CDD:197624 2/7 (29%)
KAZAL_FS 654..687 CDD:238052 13/37 (35%)
KAZAL_FS 723..767 CDD:238052
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4004
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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