DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-3 and hscA

DIOPT Version :10

Sequence 1:NP_511132.2 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_417021.1 Gene:hscA / 944885 ECOCYCID:EG12130 Length:616 Species:Escherichia coli


Alignment Length:625 Identity:234/625 - (37%)
Similarity:363/625 - (58%) Gaps:49/625 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GLSLGEEKKEKDKELGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTADGERLIG 78
            |||....::.      ...|||||||.|.|...::|:.|.:|:.:|..:.||.|.:...|.. :|
E. coli    10 GLSAAPHQRR------LAAGIDLGTTNSLVATVRSGQAETLADHEGRHLLPSVVHYQQQGHS-VG 67

  Fly    79 DAAKNQLTTNPENTVFDAKRLIGREWSDTNVQHDIKFFPFKV-VEKNSKPHISVDTSQGAKVFAP 142
            ..|:.....:..||:...|||:||..:|  :|......|::. ..:|..|  .::|:.|  :..|
E. coli    68 YDARTNAALDTANTISSVKRLMGRSLAD--IQQRYPHLPYQFQASENGLP--MIETAAG--LLNP 126

  Fly   143 EEISAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQVMRIINEPTAAAI 207
            ..:||.:|..:...|...|..::...|:||||||:|||||.||||..:|||.|:|::||||||||
E. coli   127 VRVSADILKALAARATEALAGELDGVVITVPAYFDDAQRQGTKDAARLAGLHVLRLLNEPTAAAI 191

  Fly   208 AYGLDKKEGEKNVL-VFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKLYK 271
            |||||  .|::.|: |:||||||||:|:|.:..|||||:||.||:.|||:|||..:.|:.    :
E. coli   192 AYGLD--SGQEGVIAVYDLGGGTFDISILRLSRGVFEVLATGGDSALGGDDFDHLLADYI----R 250

  Fly   272 KKKGKDIRKDNRAVQKLRREVEKAKRALSGSHQVRIEIESFFEGDDFSETLTRAKFEELNLDLFR 336
            ::.|...|.|||..::|......||.|||.:..|.:.:.. ::|:     ::|.:|.||...|.:
E. coli   251 EQAGIPDRSDNRVQRELLDAAIAAKIALSDADSVTVNVAG-WQGE-----ISREQFNELIAPLVK 309

  Fly   337 STLKPVQKVLEDADMNKKDVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGAAVQ 401
            .||...::.|:||.:...:|.|:|:||||||:|.|::.|.:|| |:.|...|:||:.||.|||:|
E. coli   310 RTLLACRRALKDAGVEADEVLEVVMVGGSTRVPLVRERVGEFF-GRPPLTSIDPDKVVAIGAAIQ 373

  Fly   402 AGVLSGEQDTDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQVFSTASDNQHTVTIQVY 466
            |.:|.|.:....::||||.||::|:||:||::.|:|||||.||..::|.|:|..|.|..::|.|.
E. coli   374 ADILVGNKPDSEMLLLDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVM 438

  Fly   467 EGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVSFEIDANGILQVSAEDKGTGNKEKIVITNDQN 531
            :|||.:.:|...|.:|.|.|||..|.|...|.|:|::||:|:|.|:|.:|.||.:..|.:.....
E. coli   439 QGERELVQDCRSLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYG 503

  Fly   532 RLTPEDIDRMIRDAEKFADEDKKLK----ERVESRNELESYAYSL----------KNQIGDKDKL 582
             ||..:|..||:|:..:|::|.|.:    ::||:...|||...:|          :.|:  .|..
E. coli   504 -LTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQV--IDDA 565

  Fly   583 GAKLSDDEKNKLESAIDESIKWLEQNPDADPEEYKKQKKD 622
            .|.||:..:.....||:::||    |.|...:::..::.|
E. coli   566 AAHLSEVAQGDDVDAIEQAIK----NVDKQTQDFAARRMD 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-3NP_511132.2 PTZ00009 32..643 CDD:240227 231/607 (38%)
hscANP_417021.1 hscA 1..616 CDD:235360 234/625 (37%)

Return to query results.
Submit another query.