DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-3 and SSB1

DIOPT Version :9

Sequence 1:NP_001285139.1 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_010052.1 Gene:SSB1 / 851369 SGDID:S000002388 Length:613 Species:Saccharomyces cerevisiae


Alignment Length:602 Identity:331/602 - (54%)
Similarity:441/602 - (73%) Gaps:11/602 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTTNPENTVFDA 96
            ||||||||||||..|::. ||||||:||||:|||:||||.: |||||||||||...||.||||||
Yeast    10 IGIDLGTTYSCVATYESS-VEIIANEQGNRVTPSFVAFTPE-ERLIGDAAKNQAALNPRNTVFDA 72

  Fly    97 KRLIGREWSDTNVQHDIKFFPFKVVEKNSKPHISVDTSQGAKVFAPEEISAMVLGKMKETAEAYL 161
            ||||||.:.|.:||.|:|.:||||::.:..|.|.|...:..|.|:|:|||||||.||||.|||.:
Yeast    73 KRLIGRRFDDESVQKDMKTWPFKVIDVDGNPVIEVQYLEETKTFSPQEISAMVLTKMKEIAEAKI 137

  Fly   162 GKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQVMRIINEPTAAAIAYGL--DKKEGEKNVLVFD 224
            ||||..||:||||||||||||||||||.|:||.|:|||||||||||||||  .|.|.|::||:||
Yeast   138 GKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGLGAGKSEKERHVLIFD 202

  Fly   225 LGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKLYKKKKGKDIRKDNRAVQKLR 289
            |||||||||||.|..||:.|.:|:|:|||||:|||..:::||...:|||.|.||..|.||:::||
Yeast   203 LGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKAEFKKKTGLDISDDARALRRLR 267

  Fly   290 REVEKAKRALSGSHQVRIEIESFFEGDDFSETLTRAKFEELNLDLFRSTLKPVQKVLEDADMNKK 354
            ...|:|||.||...|..:|::|.|:|:||..:||||:||:||..||:|||:||::||:||.::|.
Yeast   268 TAAERAKRTLSSVTQTTVEVDSLFDGEDFESSLTRARFEDLNAALFKSTLEPVEQVLKDAKISKS 332

  Fly   355 DVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGAAVQAGVLSGEQDTDA---IVL 416
            .:.|:|||||||||||||:|:.|||.||:..:.||||||||||||||..:|:|:..:|.   ::|
Yeast   333 QIDEVVLVGGSTRIPKVQKLLSDFFDGKQLEKSINPDEAVAYGAAVQGAILTGQSTSDETKDLLL 397

  Fly   417 LDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQVFSTASDNQHTVTIQVYEGERPMTKDNHLLGK 481
            |||.||::|:...|.:...::||||.:||.|.:.|:|.:|||.||...||:|||...|:|.|||:
Yeast   398 LDVAPLSLGVGMQGDMFGIVVPRNTTVPTIKRRTFTTCADNQTTVQFPVYQGERVNCKENTLLGE 462

  Fly   482 FDLTGIPPAPRGIPQIEVSFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPEDIDRMIRDAE 546
            |||..||..|.|.|.:|..||:||||||:|:|.:|.||....|.|:|...||:.|:|::|:..||
Yeast   463 FDLKNIPMMPAGEPVLEAIFEVDANGILKVTAVEKSTGKSSNITISNAVGRLSSEEIEKMVNQAE 527

  Fly   547 KFADEDKKLKERVESRNELESYAYSLKNQIGDKDKLGAKLSDDEKNKLESAIDESIKWLE-QNPD 610
            :|...|:...::.|:|..||||..|::..:.| ..|.:||....|:|:|:|:.:::..|: ::|.
Yeast   528 EFKAADEAFAKKHEARQRLESYVASIEQTVTD-PVLSSKLKRGSKSKIEAALSDALAALQIEDPS 591

  Fly   611 ADPEEYKKQKKDLEAIV 627
            ||  |.:|.:..|:.:|
Yeast   592 AD--ELRKAEVGLKRVV 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-3NP_001285139.1 HSPA5-like_NBD 29..403 CDD:212681 239/372 (64%)
PTZ00009 32..643 CDD:240227 331/602 (55%)
SSB1NP_010052.1 PTZ00009 6..575 CDD:240227 321/567 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100083
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.710

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