DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-3 and hspa12a

DIOPT Version :9

Sequence 1:NP_001285139.1 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster
Sequence 2:XP_017207164.1 Gene:hspa12a / 751725 ZFINID:ZDB-GENE-031001-1 Length:671 Species:Danio rerio


Alignment Length:654 Identity:147/654 - (22%)
Similarity:233/654 - (35%) Gaps:207/654 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EEKKEKDKELGTVIGIDLGTTYS-----------CVGVYKNGRVEIIANDQG--NRITPSYVAFT 70
            ||.:........|:.||.|||.|           |:...:...    ..|.|  |:.||:.:..|
Zfish    44 EENEPPRHHFVVVVAIDFGTTSSGYAYAFTKEPECIHTMRRWE----GGDPGVSNQKTPTTILLT 104

  Fly    71 ADGE-RLIGDAAKNQLTTNPENTVFDAKRLIGREWSDTNVQHDIKFFPFKVVEKNSKPHISVDT- 133
            .|.: ...|.||:        :...|......::|        :....|| ::.::..::|:|| 
Zfish   105 PDKKFHSFGYAAR--------DFYHDLDPTESKQW--------LYLEKFK-MKLHTTANLSIDTD 152

  Fly   134 ---SQGAKVFAPEEISAMVLGKMKETAEAYL----GKKVTHA----VVTVPAYFNDAQRQATKDA 187
               :.|.||.| .:|.|..|...||.|...|    |.:..:|    |:||||.:....:|..::|
Zfish   153 LHAANGKKVKA-LDIFAYALAFFKEQALKELSDQAGAEFDNADVRWVITVPAIWKMPAKQFMREA 216

  Fly   188 GVIAGLQVMR-------IINEPTAAAI----------------------------AYGL------ 211
            ...|.| |.|       |..||.||:|                            ..|:      
Zfish   217 AYKAAL-VTRENPDQLIIALEPEAASIYCRKLRLHQMVDLGSKTALNGYSPTDNAGVGMTQAKEH 280

  Fly   212 ---------------------DKKEGEKNVLVFDLGGGTFDVSL--LTIDNGVFEVV--ATNGDT 251
                                 :..||::.|:| |.||||.|:::  :.:..|..:.:  |:.|..
Zfish   281 VRRNRQSRTFLVENVIGELWSELAEGDRYVVV-DCGGGTVDLTVHQIRLPEGHLKELYKASGGPY 344

  Fly   252 HLGGEDFDQRVMDHFIKLYKKKKGKDI-----RKDNRAVQKLRREVEKAKRALSGSHQVRIEIE- 310
            ...|.|::      |.||..|..|:|.     .|...|...|....|..|||.:......:.|. 
Zfish   345 GSIGIDYE------FEKLLCKIFGQDFIDQFKIKRPAAWVDLMIAFESRKRAATPDRSNPLNINL 403

  Fly   311 --SF------FEGDDFSETLTRAKFE----------ELNLDLFRSTLKP-----VQKVLEDADMN 352
              ||      |.|......|.::..:          .::.|...:..||     :|.:.|..|..
Zfish   404 PFSFIDYYKKFRGHSVEHALRKSNVDFVKWSSQGMLRMSPDAMNALFKPTIDHIIQHLTELFDRP 468

  Fly   353 K-KDVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGAAVQAG-VLSGEQDTDAIV 415
            : .|:..:.||||....|.:||.|::...|:  ||.|.|.:.   |..:..| ||.|..  .:|:
Zfish   469 EVTDIKFLFLVGGFAESPLLQQAVQNMLQGR--SRIIIPHDV---GLTILKGAVLFGLD--PSII 526

  Fly   416 LLDVNPLTMGIETVGGVMTKLI-----PR---------------NTVIPTKKS--------QVFS 452
            .:..:|||.|:    ||:.:.:     |.               :|.|...:|        :.::
Zfish   527 KVRRSPLTYGV----GVLNRFVEGKHPPEKMLVKDGMRWCTDVFDTFISADQSVALGETVKRSYT 587

  Fly   453 TASDNQHTVTIQVYEGERP---------MTKDNHLLGKFDLTGI-PPAPRGIPQIEVSF---EID 504
            .|..:|..:.|.||..|:.         :.|...|  |.|::|. .||.|...|..:.|   ||.
Zfish   588 PAKPSQQVIVIHVYCSEKESVTFITDPGVRKCGSL--KLDVSGTESPAARREIQTLMQFGDTEIR 650

  Fly   505 ANGI 508
            |..:
Zfish   651 AMAV 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-3NP_001285139.1 HSPA5-like_NBD 29..403 CDD:212681 111/495 (22%)
PTZ00009 32..643 CDD:240227 144/641 (22%)
hspa12aXP_017207164.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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