DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-3 and Hspa12a

DIOPT Version :9

Sequence 1:NP_001285139.1 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster
Sequence 2:XP_006527440.1 Gene:Hspa12a / 73442 MGIID:1920692 Length:695 Species:Mus musculus


Alignment Length:666 Identity:150/666 - (22%)
Similarity:236/666 - (35%) Gaps:223/666 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VIGIDLGTTYS-----------CVGVYKNGRVEIIANDQG--NRITPSYVAFTADGE-RLIGDAA 81
            |:.||.|||.|           |:.|.:...    ..|.|  |:.||:.:..|.:.: ...|.||
Mouse    78 VVAIDFGTTSSGYAYSFTKEPECIHVMRRWE----GGDPGVSNQKTPTTILLTPERKFHSFGYAA 138

  Fly    82 KNQLTTNPENTVFDAKRLIGREWSDTNVQHDIKFFPFKVVEKNSKPHISVDT----SQGAKVFAP 142
            :        :...|......::|        :....|| ::.::...:::||    :.|.||.| 
Mouse   139 R--------DFYHDLDPSEAKQW--------LYLEKFK-MKLHTTGDLTMDTDLTAANGKKVKA- 185

  Fly   143 EEISAMVLGKMKETAEAYLGKKV--------THAVVTVPAYFNDAQRQATKDAGVIAGL------ 193
            .||.|..|...||.|...|..:.        ...|:||||.:....:|..::|...|||      
Mouse   186 LEIFAYALQYFKEQALKELSDQAGSDFENSDVRWVITVPAIWKQPAKQFMREAAYQAGLASPENS 250

  Fly   194 QVMRIINEPTAAAI--------------------AYGL--------------------------- 211
            :.:.|..||.||:|                    .|..                           
Mouse   251 EQLIIALEPEAASIYCRKLRLHQMIELSSKAVVNGYSASDTVGAGFAQAKEHVRRNRQSRTFLVE 315

  Fly   212 --------DKKEGEKNVLVFDLGGGTFDVSL--LTIDNGVFEVV--ATNGDTHLGGEDFDQRVMD 264
                    :.:||:|.|:| |.||||.|:::  :.:..|..:.:  ||.|.....|.|::     
Mouse   316 NVIGEIWSELEEGDKYVVV-DSGGGTVDLTVHQIRLPEGHLKELYKATGGPYGSLGVDYE----- 374

  Fly   265 HFIKLYKKKKGKDIRKDNRAVQKLRREV---------EKAKRALSGSHQVRIEIE---SF----- 312
             |.||..|..|:|..:.    .|::|..         |..|||.:......:.|.   ||     
Mouse   375 -FEKLLCKIFGEDFIEQ----FKIKRPAAWVDLMIAFESRKRAAAPDRTNPLNITLPFSFIDYYK 434

  Fly   313 -FEGD-----------DF----SETLTRAKFEELNLDLFRSTLKPVQKVLEDADMNKKDVHEI-- 359
             |.|.           ||    |:.:.|...:.:|. ||:.|:..:.:.|.|. ..|.:|..:  
Mouse   435 KFRGHSVEHALRKSNVDFVKWSSQGMLRMSPDAMNA-LFKPTIDSIIEHLRDL-FQKPEVSTVKF 497

  Fly   360 -VLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGAAVQAG-VLSGEQDTDAIVLLDVNPL 422
             .||||....|.:||.|:..||.|  .|.|.|.:.   |..:..| ||.|..  .|::.:..:||
Mouse   498 LFLVGGFAEAPLLQQAVQTAFGDK--CRIIIPQDV---GLTILKGAVLFGLD--PAVIKVRRSPL 555

  Fly   423 TMGIETVGGVMTKLI-----PRNTVIP-------------------------TKKSQVFSTASDN 457
            |.|:    ||:.:.:     |...::.                         .|:|  ::.|..:
Mouse   556 TYGV----GVLNRYVEGKHPPEKLLVKDGTRWCTDVFDKFISADQSVALGELVKRS--YTPAKPS 614

  Fly   458 QHTVTIQVYEGER--------PMTKDNHLLGKFDLTG----IPPAPRGIPQIEVSFEIDANGILQ 510
            |..:.|.:|..|.        |..|....| :.||||    ..||.|.|..|....:.:    ::
Mouse   615 QLVIIINIYSSEHDNVSFITDPGVKKCGTL-RLDLTGSGGTAVPARREIQTIMQFGDTE----IK 674

  Fly   511 VSAEDKGTGNKEKIVI 526
            .:|.|..|....|:.|
Mouse   675 ATAVDITTSKSVKVGI 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-3NP_001285139.1 HSPA5-like_NBD 29..403 CDD:212681 114/498 (23%)
PTZ00009 32..643 CDD:240227 149/665 (22%)
Hspa12aXP_006527440.1 HSPA12A_like_NBD 77..543 CDD:212685 117/504 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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