DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-3 and Hspa2

DIOPT Version :9

Sequence 1:NP_001285139.1 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_068635.1 Gene:Hspa2 / 60460 RGDID:620664 Length:633 Species:Rattus norvegicus


Alignment Length:624 Identity:390/624 - (62%)
Similarity:491/624 - (78%) Gaps:7/624 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTTNPENTV 93
            |..||||||||||||||:::|:|||||||||||.|||||||| |.|||||||||||:..||.||:
  Rat     5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTI 68

  Fly    94 FDAKRLIGREWSDTNVQHDIKFFPFKVVEKNSKPHISVDTSQGAKVFAPEEISAMVLGKMKETAE 158
            |||||||||::.|..||.|:|.:||:||.:..||.:.|:.....|.|.|||||:|||.||||.||
  Rat    69 FDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAE 133

  Fly   159 AYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQVMRIINEPTAAAIAYGLDKK---EGEKNV 220
            ||||.||..||:||||||||:|||||||||.|.||.|:||||||||||||||||||   .|||||
  Rat   134 AYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNV 198

  Fly   221 LVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKLYKKKKGKDIRKDNRAV 285
            |:|||||||||||:|||::|:|||.:|.|||||||||||.|::.|..:.:|:|..|||..:.|||
  Rat   199 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAV 263

  Fly   286 QKLRREVEKAKRALSGSHQVRIEIESFFEGDDFSETLTRAKFEELNLDLFRSTLKPVQKVLEDAD 350
            ::||...|:|||.||.|.|..|||:|.:||.||..::|||:|||||.||||.||:||:|.|.||.
  Rat   264 RRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAK 328

  Fly   351 MNKKDVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGAAVQAGVLSGE--QDTDA 413
            ::|..:.|||||||||||||:|:|::|||.|||.::.|||||||||||||||.:|.|:  ::...
  Rat   329 LDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQD 393

  Fly   414 IVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQVFSTASDNQHTVTIQVYEGERPMTKDNHL 478
            ::||||.||::||||.|||||.||.|||.||||::|.|:|.||||.:|.:|||||||.|||||:|
  Rat   394 LLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNL 458

  Fly   479 LGKFDLTGIPPAPRGIPQIEVSFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPEDIDRMIR 543
            |||||||||||||||:|||||:|:|||||||.|:|.||.||.:.||.||||:.||:.:|||||::
  Rat   459 LGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLSKDDIDRMVQ 523

  Fly   544 DAEKFADEDKKLKERVESRNELESYAYSLKNQIGDKDKLGAKLSDDEKNKLESAIDESIKWLEQN 608
            :|:.:..||:..::||.::|.:|||.|::|..:.| :||..|:|:.:|||:.....|.|.||::|
  Rat   524 EADGYKSEDEANRDRVAAKNAVESYTYNIKQTVED-EKLRGKISEQDKNKILDKCQEVINWLDRN 587

  Fly   609 PDADPEEYKKQKKDLEAIVQPVIAKLYQGAGGAPPPEGG 647
            ..|:.:||:.::|:||.:..|:|:|||||..|.....||
  Rat   588 QMAEKDEYEHKQKELERVCNPIISKLYQGGPGGGGSSGG 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-3NP_001285139.1 HSPA5-like_NBD 29..403 CDD:212681 255/376 (68%)
PTZ00009 32..643 CDD:240227 387/615 (63%)
Hspa2NP_068635.1 PTZ00009 2..615 CDD:240227 384/611 (63%)
Nucleotide-binding domain (NBD). /evidence=ECO:0000250|UniProtKB:P11142 2..389 258/384 (67%)
HSPA1-2_6-8-like_NBD 7..383 CDD:212675 255/376 (68%)
Substrate-binding domain (SBD). /evidence=ECO:0000250|UniProtKB:P11142 397..512 84/114 (74%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 613..633 7/14 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53894
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100083
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

Return to query results.
Submit another query.