DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-3 and hspa14

DIOPT Version :9

Sequence 1:NP_001285139.1 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_001038541.1 Gene:hspa14 / 565232 ZFINID:ZDB-GENE-041210-73 Length:504 Species:Danio rerio


Alignment Length:521 Identity:174/521 - (33%)
Similarity:289/521 - (55%) Gaps:53/521 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTTNPENTVFDA 96
            ||:..|.|.:||.|:|:||.:::|||.|:|:||:.||: .|.|:::|.|||.....|..|||...
Zfish     4 IGVHFGYTCACVAVFKDGRADVVANDAGDRVTPAVVAY-RDTEQIVGIAAKQGRIRNAANTVVKV 67

  Fly    97 KRLIGREWSDTNVQHDIKFFPFKVVEKNSKPHISVDTSQGAKVFAPEEISAMVLGKMKETAEAYL 161
            |:::||.:.|.:.|...:.....||.|:..|...:||.:..|..:||:::.::..||||||::.|
Zfish    68 KQILGRRYDDPDAQAHKEESKCIVVNKSGLPRYEIDTGETTKYVSPEDVAKLIFHKMKETAQSAL 132

  Fly   162 GKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQVMRIINEPTAAAIAY--GLDKKEGEKNVLVFD 224
            |..|..||:|||..|::.|:.|.:.|...||..|:|:|:||:||.:||  |.|...|:.:|||:.
Zfish   133 GSDVKDAVITVPFEFDEMQKNALRQAAESAGFNVLRLIHEPSAALLAYDIGQDSPLGKSHVLVYK 197

  Fly   225 LGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKLYKKKKGKDIRKDNRAVQKLR 289
            |||.:..|::|.:::||:.|:||..|...|||.|.|.:..|....:||...:|:..:.||:.||.
Zfish   198 LGGTSLSVTVLEVNSGVYRVLATQTDHQTGGESFTQELAQHLAAEFKKTFKQDVSGNARAMMKLM 262

  Fly   290 REVEKAKRALSGSHQVRIEIESFFEGDDFSETLTRAKFEELNLDLFRSTLKPVQKVLEDADMNKK 354
            ...:.||..||........::|.::|.||...::||:||.:...||...::|::.:||..:::..
Zfish   263 NSADVAKHTLSTLGSANCFVDSLYDGMDFECNVSRARFELICSSLFNKCIQPIKSLLEQVNLSTS 327

  Fly   355 DVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGAAVQAGVLSGEQDTDAIVLLD- 418
            ||:::||.|||.||||:||:::|.|...|....|.|||.:..|||:|||:|.|:   |::.|.: 
Zfish   328 DVNKVVLSGGSARIPKLQQMIRDLFPDVELLNSIPPDEVIPVGAAMQAGILVGK---DSLALGED 389

  Fly   419 -------VNPLTM------GIETVGGVMTKLIPRNTVIPTKKSQVFSTASDNQHT---------V 461
                   .:.:|:      |:|    |.|.|.|..|.:|.::          |||         |
Zfish   390 SITVDCCASDITLKEVDDSGLE----VFTVLFPSGTPLPARR----------QHTLQGPGSLSSV 440

  Fly   462 TIQVYEGERPMTKDNHLLGKFDLTGIPPAPR-GIPQIEVSFEIDANGILQVSAEDKGTGNKEKIV 525
            .:|:::.::|:.:  .:||..:       |: .:..:.....:..:|.|.|:..::.:|..|.|.
Zfish   441 RLQLFQAQQPIAQ--IVLGDLE-------PKEELHDVVTVLTMKRDGSLHVTCTEQSSGRSEAIT 496

  Fly   526 I 526
            |
Zfish   497 I 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-3NP_001285139.1 HSPA5-like_NBD 29..403 CDD:212681 143/372 (38%)
PTZ00009 32..643 CDD:240227 174/521 (33%)
hspa14NP_001038541.1 HSPA14-like_NBD 2..376 CDD:212680 143/372 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.