DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-3 and hspa13

DIOPT Version :9

Sequence 1:NP_001285139.1 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_001082948.1 Gene:hspa13 / 560481 ZFINID:ZDB-GENE-070410-58 Length:438 Species:Danio rerio


Alignment Length:419 Identity:173/419 - (41%)
Similarity:250/419 - (59%) Gaps:29/419 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LCILLAVVAFVGLSLGEEKKEKDKELGTVIGIDLGTTYSCVGVYK--NGRVEIIANDQGNRITPS 65
            |.:|||..      ||::.....|.  .|||:|||||:..|||::  .|.:|||.:|:|.:..||
Zfish    13 LALLLAGY------LGQQYLPPPKP--RVIGLDLGTTFCSVGVFQPGTGEIEIIEDDKGRKSIPS 69

  Fly    66 YVAFTADGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDTNVQHDIKFFPFKVVEKNSKPHIS 130
            .|:||..|. ..|...:.....||:||::||||.||:.:.:..::.:...:||||:..|......
Zfish    70 VVSFTLTGV-FAGHEGQELSDVNPQNTIYDAKRFIGKIFDEETLEKESARYPFKVIFNNGSADFL 133

  Fly   131 VDTSQGAKVFAPEEISAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQV 195
            |:|:....| .||.|.:.:|.||::.||..||..|..||::|||.|::.||..|..|..:|||.|
Zfish   134 VNTNSTFTV-TPEFIGSRLLLKMRKMAEKQLGVPVEKAVISVPAEFDERQRNYTIRAANLAGLDV 197

  Fly   196 MRIINEPTAAAIAYGLDKKEGEKNVLVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQ 260
            :|:||||||||:||||.|.| ..||||.||||||.|||||....|:|...|..|:..|||:||.|
Zfish   198 LRVINEPTAAAMAYGLHKAE-VFNVLVVDLGGGTLDVSLLNKQGGMFLTRAMAGNNQLGGQDFTQ 261

  Fly   261 RVMDHFIKLYKKKKG--KDIRKDNRAVQKLRREVEKAKRALSGSHQVRIEIESFFEGDD------ 317
            |::.:..:..:::.|  ..:::|   :..||:.||.||..|:....|.:.:..:.:...      
Zfish   262 RLLQYTTERVRQQYGVPPTLKED---IHLLRQAVEAAKLNLTQEPHVHLRVPLYLQMTGASGAQE 323

  Fly   318 ----FSETLTRAKFEELNLDLFRSTLKPVQKVLEDADMNKKDVHEIVLVGGSTRIPKVQQLVKDF 378
                |.|.|||..|||||.|||:..|.|::.||.:..::|::|.||||||||||||:::||:..:
Zfish   324 EKVLFEEKLTRETFEELNADLFQKILAPIETVLVEGHLDKQEVDEIVLVGGSTRIPRIRQLISQY 388

  Fly   379 FGGKEPSRGINPDEAVAYGAAVQAGVLSG 407
            | ||||:..::||.||..|.|:|||::.|
Zfish   389 F-GKEPNTSVDPDLAVVTGVAIQAGIMGG 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-3NP_001285139.1 HSPA5-like_NBD 29..403 CDD:212681 163/387 (42%)
PTZ00009 32..643 CDD:240227 165/390 (42%)
hspa13NP_001082948.1 HSPA13-like_NBD 23..430 CDD:212679 167/403 (41%)
PRK13930 32..409 CDD:237564 161/383 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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