DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-3 and Hspa12b

DIOPT Version :9

Sequence 1:NP_001285139.1 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_001381945.1 Gene:Hspa12b / 311427 RGDID:1312004 Length:685 Species:Rattus norvegicus


Alignment Length:708 Identity:137/708 - (19%)
Similarity:236/708 - (33%) Gaps:263/708 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EEKKEKDKELGTVIGIDLGTTYSCVGVYKNGRVEIIANDQ----------------GNRITPSYV 67
            |.:..:......|:.||.|||.|       |.....|.|.                .::.||:.:
  Rat    50 EVRAPQRASFSVVVAIDFGTTSS-------GYAFSFATDPEAIHMMRKWEGGDPGVAHQKTPTCL 107

  Fly    68 AFTADG-ERLIGDAAKNQL-TTNPENTVFDAKRLIGREWSDTNVQHDIKFFPFKVVEKNSKPHIS 130
            ..|.:| ....|..|::.. ..:||.         .|:|        :.|..||:     |.|.:
  Rat   108 LLTPEGIFHSFGYTARDYYHDLDPEE---------ARDW--------LYFEKFKM-----KIHSA 150

  Fly   131 VDTS--------QGAKVFAPEEISAMV-------LGKMKETAEAYLGKKVTHAVVTVPAYFNDAQ 180
            .|.:        .|.|:.|.|..:..:       |.:::|.:|..|.|.....|:||||.:....
  Rat   151 TDLTLKTQLEAVNGKKMLALEVFAHALRFFKEHALQELREQSECMLEKDAVRWVLTVPAIWKQPA 215

  Fly   181 RQATKDAGVIAGL------QVMRIINEPTAAAI-----------------AYG------------ 210
            :|..::|..:|||      :.:.|..||.||::                 |.|            
  Rat   216 KQFMREAAYLAGLVSREDAEKLLIALEPEAASVYCRKLRLHQLMDLSSRTAGGGRLGERRSIDSS 280

  Fly   211 ---------------------------LDKKEGEKNVLVFDLGGGTFDVSLLTID--NGVFEVV- 245
                                       .:.:||:: .:|.|.||||.|:::..::  :|..:.: 
  Rat   281 FRHAREQLRRSRHSRTFLVESGVGELWSEMQEGDR-YMVADCGGGTVDLTVHQLEQPHGTLKELY 344

  Fly   246 -ATNGDTHLGGED--FDQRVMDHFIKLYKKKKGKDIRKDNRAVQKLRRE----------VEKAKR 297
             |:.|.....|.|  |:|.:...|        |:|.      :.|.:|:          ..:|::
  Rat   345 KASGGPYGAVGVDLAFEQLLCRIF--------GEDF------IAKFKRQRPAAWVDLTIAFEARK 395

  Fly   298 ALSGSHQV-RIEIESFFEGDDF------------------------SETLTRAKFEELNLDLFRS 337
            ..:|.|:. .:.|...|...||                        |:.:.|...|.:| :||:.
  Rat   396 RTAGPHRAGALNISLPFSFIDFYRKQRGHNVETALRRSSVNFVKWSSQGMLRMSCEAMN-ELFQP 459

  Fly   338 TLKPVQKVLED--ADMNKKDVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGAAV 400
            |:..:.:.:|.  |....:.|..:.||||......:|..|::..|    :||:........|..:
  Rat   460 TVSGIIQHIEMLLAKPEVQGVKLLFLVGGFAESAVLQHAVQEALG----NRGLRVVVPHDVGLTI 520

  Fly   401 QAG-VLSGEQDTDAIVLLDVNPLTMGIETVGGVMTKLIP-------------------------- 438
            ..| ||.|:  ...:|.:..:|||.|:    ||:.:.:|                          
  Rat   521 LKGAVLFGQ--APGVVRVRRSPLTYGV----GVLNRFVPGHHPPEKLLVRDGRRWCTDVFERFVA 579

  Fly   439 --RNTVIPTKKSQVFSTASDNQHTVTIQVY----EGERPMTKDNHLLGKFDLTGIPPAPRGIPQI 497
              ::..:..:..:.:..|...|..|.|.:|    |..|.:|              .|..|....:
  Rat   580 AEQSVALGEEVRRSYCPARPGQRRVLINLYCCAAEDARFIT--------------DPGVRKCGAL 630

  Fly   498 EVSFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPEDIDRMIRDAEKFADEDKKL 555
              |.|::..|    |.|:.||....                 |.||.|.:|.|.:.|:
  Rat   631 --SLELEPEG----SPENTGTSPSR-----------------REIRAAMQFGDTEIKV 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-3NP_001285139.1 HSPA5-like_NBD 29..403 CDD:212681 100/511 (20%)
PTZ00009 32..643 CDD:240227 135/695 (19%)
Hspa12bNP_001381945.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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