DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-3 and Hspa12a

DIOPT Version :9

Sequence 1:NP_001285139.1 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster
Sequence 2:XP_017444569.1 Gene:Hspa12a / 307997 RGDID:1305531 Length:691 Species:Rattus norvegicus


Alignment Length:672 Identity:156/672 - (23%)
Similarity:239/672 - (35%) Gaps:235/672 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VIGIDLGTTYS-----------CVGVYKNGRVEIIANDQG--NRITPSYVAFTADGE-RLIGDAA 81
            |:.||.|||.|           |:.|.:...    ..|.|  |:.||:.:..|.:.: ...|.||
  Rat    74 VVAIDFGTTSSGYAYSFTKEPECIHVMRRWE----GGDPGVSNQKTPTTILLTPERKFHSFGYAA 134

  Fly    82 K---NQLTTNPENTVFDAKRLIGREWSDTNVQHDIKFFPFKVVEKNSKPHISVDT----SQGAKV 139
            :   :.|..|      :||:.:..|             .|| ::.::...:::||    :.|.||
  Rat   135 RDFYHDLDPN------EAKQWLYLE-------------KFK-MKLHTTGDLTMDTDLTAANGKKV 179

  Fly   140 FAPEEISAMVLGKMKETAEAYLGKKV--------THAVVTVPAYFNDAQRQATKDAGVIAGL--- 193
            .| .||....|...||.|...|..:.        ...|:||||.:....:|..::|...|||   
  Rat   180 KA-LEIFTYALQYFKEQALKELSDQAGSDFENSDVRWVITVPAIWKQPAKQFMREAAYQAGLASP 243

  Fly   194 ---QVMRIINEPTAAAI--------------------AYGL------------------------ 211
               :.:.|..||.||:|                    .|..                        
  Rat   244 ENSEQLIIALEPEAASIYCRKLRLHQMIELSSKAVVNGYSASDTVGAGFAQAKEHVRRNRQSRTF 308

  Fly   212 -----------DKKEGEKNVLVFDLGGGTFDVSL--LTIDNGVFEVV--ATNGDTHLGGEDFDQR 261
                       :.:||:|.|:| |.||||.|:::  :.:..|..:.:  ||.|.....|.|::  
  Rat   309 LVENVIGEIWSELEEGDKYVVV-DSGGGTVDLTVHQIRLPEGHLKELYKATGGPYGSLGVDYE-- 370

  Fly   262 VMDHFIKLYKKKKGKDIRKDNRAVQKLRREV---------EKAKRALSGSHQVRIEIE---SF-- 312
                |.||..|..|:|..:.    .|::|..         |..|||.:......:.|.   ||  
  Rat   371 ----FEKLLCKIFGEDFIEQ----FKIKRPAAWVDLMIAFESRKRAAAPDRTNPLNITLPFSFID 427

  Fly   313 ----FEGD-----------DF----SETLTRAKFEELNLDLFRSTLKPVQKVLEDADMNKKDVHE 358
                |.|.           ||    |:.:.|...:.:|. ||:.|:..:.:.|.|. ..|.:|..
  Rat   428 YYKKFRGHSVEHALRKSNVDFVKWSSQGMLRMSPDAMNA-LFKPTIDSIIEHLRDL-FQKPEVST 490

  Fly   359 I---VLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGAAVQAG-VLSGEQDTDAIVLLDV 419
            :   .||||....|.:||.|:..||.|  .|.|.|.:.   |..:..| ||.|..  .|::.:..
  Rat   491 VKFLFLVGGFAEAPLLQQAVQAAFGDK--CRIIIPQDV---GLTILKGAVLFGLD--PAVIKVRR 548

  Fly   420 NPLTMGIETVGGVMTKLI-----PRNTVIP-------------------------TKKSQVFSTA 454
            :|||.|:    ||:.:.:     |...::.                         .|:|  ::.|
  Rat   549 SPLTYGV----GVLNRYVEGKHPPEKLLVKDGTRWCTDVFDKFISADQSVALGELVKRS--YTPA 607

  Fly   455 SDNQHTVTIQVYEGER--------PMTKDNHLLGKFDLTGIP----PAPRGIPQIEVSF---EID 504
            ..:|..:.|.:|..|.        |..|....| :.||||..    ||.|.| |..:.|   ||.
  Rat   608 KPSQLVIIINIYSSENDDVSFITDPGVKKCGTL-RLDLTGTSGAAVPARREI-QTLMQFGDTEIK 670

  Fly   505 ANGILQVSAEDKGTGNKEKIVI 526
            |      :|.|..|....|:.|
  Rat   671 A------TAVDIATSKSVKVGI 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-3NP_001285139.1 HSPA5-like_NBD 29..403 CDD:212681 116/501 (23%)
PTZ00009 32..643 CDD:240227 155/671 (23%)
Hspa12aXP_017444569.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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