DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-3 and Hspa14

DIOPT Version :9

Sequence 1:NP_001285139.1 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_001004257.1 Gene:Hspa14 / 307133 RGDID:1303296 Length:509 Species:Rattus norvegicus


Alignment Length:508 Identity:177/508 - (34%)
Similarity:287/508 - (56%) Gaps:19/508 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTTNPENTVFDA 96
            ||:.||.|.:||.|||:||.:::|||.|:|:||:.||: ::.|:::|.|||.....|..:||...
  Rat     4 IGVHLGCTSACVAVYKDGRADVVANDAGDRVTPAVVAY-SEREQVVGLAAKQSRIRNISSTVVKV 67

  Fly    97 KRLIGREWSDTNVQHDIKFFPFKVVEKNSKPHISVDTSQGAKVFAPEEISAMVLGKMKETAEAYL 161
            |:::||..:|...|..|......|:|||.|....:||.:..|:.:||:::.::..||||||.:.|
  Rat    68 KQILGRSTADPQAQKYISESKCLVIEKNGKLQYEIDTGEETKLVSPEDVARLIFSKMKETAHSVL 132

  Fly   162 GKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQVMRIINEPTAAAIAYGL--DKKEGEKNVLVFD 224
            |......|||||..|.:.|:.|..:|...||..|:|:|:||:||.:|||:  |...|:.|||||.
  Rat   133 GSDANDVVVTVPFDFGEKQKSALGEAAGAAGFNVLRLIHEPSAALLAYGIGQDCPTGKSNVLVFK 197

  Fly   225 LGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFD----QRVMDHFIKLYKKKKGKDIRKDNRAV 285
            |||.:..:|::.:::|::.|::||...::||..|.    |.:...|.:|:|    .|:|...||:
  Rat   198 LGGTSLSLSIMEVNSGMYRVLSTNTSDNIGGVHFTDSLAQYLASEFQRLFK----HDVRGSARAM 258

  Fly   286 QKLRREVEKAKRALSGSHQVRIEIESFFEGDDFSETLTRAKFEELNLDLFRSTLKPVQKVLEDAD 350
            .||....|.||.:||........::|.:||.||...::||:||.|...||...::.|:.:|:.:.
  Rat   259 MKLMNSAEVAKHSLSTLGSANCFVDSLYEGQDFDCNVSRARFELLCSPLFNKCIEAVRALLQQSG 323

  Fly   351 MNKKDVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGAAVQAGVLSGEQDT--DA 413
            ....|::::||.|||:|||::|||:||.|...:....|.|||.:..|||::||:|.|::.|  |.
  Rat   324 FTADDINKVVLCGGSSRIPRLQQLIKDLFPAGDLLNSIPPDEVIPIGAAIEAGILVGKESTSGDD 388

  Fly   414 IVLLDVNP---LTMGIETVG-GVMTKLIPRNTVIPTKKSQVFSTASDNQHTVTIQVYEGE-RPMT 473
            .||::.:.   |..|::..| ...|.|.|..|.:|.::..... |..:..:|.:::||.| :...
  Rat   389 SVLIECSARDILVKGVDESGANRFTVLFPSGTPLPARRQHTLQ-APGSISSVCLELYESEGKNSV 452

  Fly   474 KDNHLLGKFDLTGIPPAPRGIPQIEVSFEIDANGILQVSAEDKGTGNKEKIVI 526
            |:.....:..|..:.....|:..|.....:..:|.|||:..|:.||..|.|.:
  Rat   453 KEETKFAQVVLQDLDKKENGLRDILAVLTMKRDGSLQVTCTDQETGKCEAITV 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-3NP_001285139.1 HSPA5-like_NBD 29..403 CDD:212681 143/376 (38%)
PTZ00009 32..643 CDD:240227 177/508 (35%)
Hspa14NP_001004257.1 HSPA14-like_NBD 2..376 CDD:212680 143/376 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.