DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-3 and Hspa4

DIOPT Version :9

Sequence 1:NP_001285139.1 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_705893.1 Gene:Hspa4 / 266759 RGDID:628878 Length:840 Species:Rattus norvegicus


Alignment Length:706 Identity:202/706 - (28%)
Similarity:343/706 - (48%) Gaps:127/706 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTTNPENTVF 94
            :|:|||||.....|.|.:.|.:|.|||:..:|.||:.|:| ....|.:|.|||:|:.:|.:|||.
  Rat     2 SVVGIDLGFQSCYVAVARAGGIETIANEYSDRCTPACVSF-GPKNRSVGAAAKSQVISNAKNTVQ 65

  Fly    95 DAKRLIGREWSDTNVQHDIKFFPFKVVEKNSKPHISVDTSQ------GAKV--------FAPEEI 145
            ..||..||.:||          ||...||:   :::.|..|      |.||        |..|::
  Rat    66 GFKRFHGRAFSD----------PFVEAEKS---NLAYDIVQLPTGLTGIKVTYMEEERNFTTEQV 117

  Fly   146 SAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQVMRIINEPTAAAIAYG 210
            :||:|.|:|||||:.|.|.|...||:||:::.||:|::..||..||||..:|::||.||.|:|||
  Rat   118 TAMLLSKLKETAESVLKKPVVDCVVSVPSFYTDAERRSVMDATQIAGLNCLRLMNETTAVALAYG 182

  Fly   211 LDK------KEGEKNVLVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKL 269
            :.|      :|..:||:..|:|...:.||:...:.|..:|:||..||.|||..||:.:::||.:.
  Rat   183 IYKQDLPALEEKPRNVVFVDMGHSAYQVSVCAFNRGKLKVLATAFDTTLGGRKFDEVLVNHFCEE 247

  Fly   270 YKKKKGKDIRKDNRAVQKLRREVEKAKRALS-GSHQVRIEIESFFEGDDFSETLTRAKFEELNLD 333
            :.||...||:...||:.:|.:|.||.|:.:| .:..:.:.||.|....|.|.|:.|.||.|:..|
  Rat   248 FGKKYKLDIKSKVRALLRLSQECEKLKKLMSANASDLPLSIECFMNDIDVSGTMNRGKFLEMCDD 312

  Fly   334 LFRSTLKPVQKVLEDADMNKKDVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGA 398
            |......|::.:|:.:.:.|:|::.:.:|||:||||.|::.:..|| |||.|..:|.||||..|.
  Rat   313 LLARVEPPLRSILDQSKLKKEDIYAVEIVGGATRIPAVKEKISKFF-GKELSTTLNADEAVTRGC 376

  Fly   399 AVQAGVLSGEQDTDAIVLLDVNPLTMGIE-----TVGGVMTKLIPRNTVIPTKKSQVFSTASDNQ 458
            |:|..:||.........:.||.|..:.:.     ..|....::.|:|...|..|...|.    .:
  Rat   377 ALQCAILSPAFKVREFSITDVVPYPISLRWNSPAEEGSSDCEVFPKNHAAPFSKVLTFY----RK 437

  Fly   459 HTVTIQV-YEGERPMTKDNHLLGKFDLTGIPPAPRG-IPQIEVSFEIDANGILQVSA-------- 513
            ...|::. |...:.:...:..:.:|.:..:.|...| ..:::|...::.:||..||:        
  Rat   438 EPFTLEAYYSSPQDLPYPDPAIAQFSVQKVTPQSDGSSSKVKVKVRVNVHGIFSVSSAALVEVHK 502

  Fly   514 ---------EDKGTGNKEKIVI------TNDQNRLTPED-------------------------- 537
                     .|:....:||:.:      |.:|...||.:                          
  Rat   503 SEESEEPMETDQNAKEEEKMQVDQEEPHTEEQQPQTPAENKAESEEMETSQAGSKDKKMDQPPQA 567

  Fly   538 ---------------------IDRMI-----RDAEKFADEDKKLKERVESRNELESYAYSLKNQI 576
                                 :||.:     .:..|...:||..|||.:::|.:|.|.|.:::::
  Rat   568 KKAKVKTSTVDLPIESQLLWQLDREMLGLYTENEGKMIMQDKLEKERNDAKNAVEEYVYEMRDKL 632

  Fly   577 -GDKDKLGAKLSDDEKNKLESAIDESIKWLEQNPDADPEE-YKKQKKDLEAIVQPV 630
             |:.:|.   :|:|::|.....::::..||.::.:..|:: |..:..:|..:.||:
  Rat   633 SGEYEKF---VSEDDRNNFTLKLEDTENWLYEDGEDQPKQVYVDKLAELRTLGQPI 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-3NP_001285139.1 HSPA5-like_NBD 29..403 CDD:212681 150/393 (38%)
PTZ00009 32..643 CDD:240227 201/704 (29%)
Hspa4NP_705893.1 HSPA4_NBD 2..384 CDD:212687 150/396 (38%)
PTZ00121 <499..743 CDD:173412 31/190 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..575 7/74 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 781..840
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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