DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-3 and Hspa1a

DIOPT Version :9

Sequence 1:NP_001285139.1 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_114177.2 Gene:Hspa1a / 24472 RGDID:1593284 Length:641 Species:Rattus norvegicus


Alignment Length:628 Identity:386/628 - (61%)
Similarity:498/628 - (79%) Gaps:12/628 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTTNPENTVF 94
            |.||||||||||||||:::|:|||||||||||.|||||||| |.|||||||||||:..||:||||
  Rat     5 TAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVALNPQNTVF 68

  Fly    95 DAKRLIGREWSDTNVQHDIKFFPFKVVEKNSKPHISVDTSQGAKVFAPEEISAMVLGKMKETAEA 159
            ||||||||::.|..||.|:|.:||:||....||.:.|:.....:.|.|||||:|||.||||.|||
  Rat    69 DAKRLIGRKFGDPVVQSDMKHWPFQVVNDGDKPKVQVNYKGENRSFYPEEISSMVLTKMKEIAEA 133

  Fly   160 YLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQVMRIINEPTAAAIAYGLDKK-EGEKNVLVF 223
            |||..||:||:||||||||:||||||||||||||.|:||||||||||||||||:. :||:|||:|
  Rat   134 YLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIF 198

  Fly   224 DLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKLYKKKKGKDIRKDNRAVQKL 288
            ||||||||||:||||:|:|||.||.|||||||||||.|::.||::.:|:|..|||.::.|||::|
  Rat   199 DLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRL 263

  Fly   289 RREVEKAKRALSGSHQVRIEIESFFEGDDFSETLTRAKFEELNLDLFRSTLKPVQKVLEDADMNK 353
            |...|:|||.||.|.|..:||:|.|||.||..::|||:||||..||||.||:||:|.|.||.::|
  Rat   264 RTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRGTLEPVEKALRDAKLDK 328

  Fly   354 KDVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGAAVQAGVLSGE--QDTDAIVL 416
            ..:|::|||||||||||||:|::|||.|::.::.|||||||||||||||.:|.|:  ::...::|
  Rat   329 AQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLL 393

  Fly   417 LDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQVFSTASDNQHTVTIQVYEGERPMTKDNHLLGK 481
            |||.||::|:||.|||||.||.||:.||||::|.|:|.||||..|.||||||||.||:||:|||:
  Rat   394 LDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNLLGR 458

  Fly   482 FDLTGIPPAPRGIPQIEVSFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPEDIDRMIRDAE 546
            |:|:||||||||:|||||:|:|||||||.|:|.||.||...||.||||:.||:.|:|:||:::||
  Rat   459 FELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAE 523

  Fly   547 KFADEDKKLKERVESRNELESYAYSLKNQIGDKDKLGAKLSDDEKNKLESAIDESIKWLEQNPDA 611
            ::..||:..:|||.::|.|||||:::|:.:.| :.|..|:|:.:|.|:.....|.|.||:.|..|
  Rat   524 RYKAEDEVQRERVAAKNALESYAFNMKSAVED-EGLKGKISEADKKKVLDKCQEVISWLDSNTLA 587

  Fly   612 DPEEYKKQKKDLEAIVQPVIAKLYQGAG-------GAPPPEGG 647
            :.||:..::::||.:..|:|:.||||||       ||..|:||
  Rat   588 EKEEFVHKREELERVCNPIISGLYQGAGAPGAGGFGAQAPKGG 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-3NP_001285139.1 HSPA5-like_NBD 29..403 CDD:212681 254/373 (68%)
PTZ00009 32..643 CDD:240227 382/620 (62%)
Hspa1aNP_114177.2 PTZ00009 1..641 CDD:240227 386/628 (61%)
Nucleotide-binding domain (NBD). /evidence=ECO:0000250|UniProtKB:P11142 2..386 257/381 (67%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 254/375 (68%)
Substrate-binding domain (SBD). /evidence=ECO:0000250|UniProtKB:P11142 394..509 79/114 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 618..641 5/13 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53894
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100083
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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