DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-3 and hsp-6

DIOPT Version :9

Sequence 1:NP_001285139.1 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_001370558.1 Gene:hsp-6 / 178873 WormBaseID:WBGene00002010 Length:657 Species:Caenorhabditis elegans


Alignment Length:645 Identity:328/645 - (50%)
Similarity:433/645 - (67%) Gaps:22/645 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SLGEEKKEKDKELGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTADGERLIGDA 80
            ||...:...||..|.|||||||||.|||.:.:....::|.|.:|.|.|||.||||||||||:|..
 Worm    18 SLMSARSLSDKPKGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAP 82

  Fly    81 AKNQLTTNPENTVFDAKRLIGREWSDTNVQHDIKFFPFKVVEKNSKPHISVDTSQGAKVFAPEEI 145
            ||.|..||..||:|..||||||.:.|..||.|:|..|:|:| |.|.....|: :|| ||::|.::
 Worm    83 AKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIV-KASNGDAWVE-AQG-KVYSPSQV 144

  Fly   146 SAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQVMRIINEPTAAAIAYG 210
            .|.||.|||||||:|||..|.:|||||||||||:|||||||||.|:||.|:|:||||||||:|||
 Worm   145 GAFVLMKMKETAESYLGTTVNNAVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYG 209

  Fly   211 LDKKEGEKNVLVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKLYKKKKG 275
            |||..|:|.:.|:||||||||||:|.|..|||||.:|||||.|||||||..::.|.:..:||::|
 Worm   210 LDKDAGDKIIAVYDLGGGTFDVSILEIQKGVFEVKSTNGDTFLGGEDFDHALVHHLVGEFKKEQG 274

  Fly   276 KDIRKDNRAVQKLRREVEKAKRALSGSHQVRIEIESFFEGDD-----FSETLTRAKFEELNLDLF 335
            .|:.||.:|:|:||...||||..||.:.|..|.: .:...|.     .:..|||||||::..||.
 Worm   275 VDLTKDPQAMQRLREAAEKAKCELSSTTQTDINL-PYITMDQSGPKHLNLKLTRAKFEQIVGDLI 338

  Fly   336 RSTLKPVQKVLEDADMNKKDVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGAAV 400
            :.|::|.:|.|.||::....:.:::||||.:|:||||..|::.| ||.||:.:|||||||.|||:
 Worm   339 KRTIEPCRKALHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAVAMGAAI 402

  Fly   401 QAGVLSGEQDTDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQVFSTASDNQHTVTIQV 465
            |..||:|  |...::||||.||::||||:||:|||||.|||.||||||||||||:|.|..|.|:|
 Worm   403 QGAVLAG--DVTDVLLLDVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKV 465

  Fly   466 YEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVSFEIDANGILQVSAEDKGTGNKEKIVITNDQ 530
            ::|||.|...|.|||:|.|.||||||||:||:||:|:||||||:.|||.|:|||.:::||| ...
 Worm   466 FQGEREMATSNKLLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVI-QSS 529

  Fly   531 NRLTPEDIDRMIRDAEKFADEDKKLKERVESRNELESYAYSLKNQIGDKDKLGAKLSDDEKNKLE 595
            ..|:.:.|:.||::|||.|.||.|.||.||..|:.|...:..:.::   .:...:|..||...|.
 Worm   530 GGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAEGIIHDTEAKM---TEFADQLPKDECEALR 591

  Fly   596 SAIDESIKWLEQNPDADPEEYKKQKKDLEAIVQPVIAKLYQGA--GGAPPPEGGDDADLK 653
            :.|.::.|.|:...:..||..|:....|    |....||::.|  ..|....|||..:.|
 Worm   592 TKIADTKKILDNKDNETPEAIKEACNTL----QQQSLKLFEAAYKNMAAKNSGGDAQEAK 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-3NP_001285139.1 HSPA5-like_NBD 29..403 CDD:212681 207/378 (55%)
PTZ00009 32..643 CDD:240227 318/617 (52%)
hsp-6NP_001370558.1 dnaK 30..646 CDD:234715 323/630 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D237853at33208
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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