DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-3 and hsp-110

DIOPT Version :10

Sequence 1:NP_511132.2 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_498868.1 Gene:hsp-110 / 176195 WormBaseID:WBGene00016250 Length:776 Species:Caenorhabditis elegans


Alignment Length:684 Identity:196/684 - (28%)
Similarity:340/684 - (49%) Gaps:78/684 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTTNPENTVF 94
            :|:|.|:|.....:||.:.|.:|:|.||.....||:.|:| ...:|.:|.||:..:|||.:|||.
 Worm     2 SVLGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSF-GPKDRSMGVAARQAVTTNIKNTVI 65

  Fly    95 DAKRLIGREWSDTNVQHDIKFFPFKVVE-KNSKPHISVDTSQGAKVFAPEEISAMVLGKMKETAE 158
            :.|.||||::||...|..|.|.|.|||: .|....:.|........|.||::.|.:|.|::...|
 Worm    66 NFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAALLTKLRTIVE 130

  Fly   159 AYLG--KKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQVMRIINEPTAAAIAYGLDKKE------ 215
            :.|.  |||:..|:.||:||.|.||:|...|...|||..:||:||.||.|:|||:.|::      
 Worm   131 SQLSDVKKVSDCVLAVPSYFTDVQRRAVLSAIQYAGLNSLRIVNETTAIALAYGIYKQDLPEEDA 195

  Fly   216 GEKNVLVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKLYKKKKGKDIRK 280
            ..:||:..|:|..:...||:..:.|..::|.|:.|...||..||..:.:||.|.:|.|.|.|...
 Worm   196 KSRNVVFLDIGHSSTQASLVAFNRGKLQMVNTSYDLESGGIWFDALIREHFRKEFKTKYGIDAAT 260

  Fly   281 DNRAVQKLRREVEKAKRALSGSH-QVRIEIESFFEGDDFSETLTRAKFEELNLDLFRSTLKPVQK 344
            ..|...:|..|.|:.|:.:|.:. .:.:.||.|.|..|.:..:.|.:||:|...:|..    :::
 Worm   261 SPRPWLRLLDECERVKKQMSANQTPIPLNIECFMEDKDVTGKMQRQEFEDLAAPIFNR----IKQ 321

  Fly   345 VL-----EDADMNKKDVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGAAVQAGV 404
            ||     :...:..:::.||.:||||:|||.::::|||.| ||||...:|.|||||.|||:|..:
 Worm   322 VLINLFADGVSIKPEEIDEIEIVGGSSRIPMIREIVKDLF-GKEPKTTMNQDEAVARGAAMQCAI 385

  Fly   405 LSGEQDTDAIVLLDVNPLTMGIE-----TVGGVMTKLIPRNTVIPTKKSQVFSTASDNQHTVTIQ 464
            ||.........:.|..|..:.:.     ..||......||:.|..:|...:..:...|     ::
 Worm   386 LSPTFRVREFAIKDTQPYRIRLSWNSTGENGGENDVFSPRDEVPFSKLVSLLRSGPFN-----VE 445

  Fly   465 VYEGERPMTKDNHL-LGKFDLTGI-PPAPRGIPQIEVSFEIDANGILQVSAEDKGTGNKEKIV-- 525
            .:..:..:...|.: :|.:.:.|. |.|..|..:::|...::.:||..:::   .|..:.:||  
 Worm   446 AHYAQPNVVPHNQVHIGSWKVNGARPGADGGNQKVKVKVRVNPDGIFTIAS---ATMYEPRIVEE 507

  Fly   526 -------ITND--------------QNRLTPEDID-----RMIRDAEKF-------ADEDKKLKE 557
                   :..|              :.:|.|.|::     .:..|.:||       .:.|.:.|.
 Worm   508 VPAEAMEVDGDAKTEAPAEPLEPVKKTKLVPVDLEVIESIPVSYDVQKFHNLELQMQESDAREKA 572

  Fly   558 RVESRNELESYAYSLKNQIGDK--DKLGAKLSDDEKNKLESAIDESIKWL-EQNPDADPEEYKKQ 619
            :.:::|.||.|.|.:::::.|:  :.:....:|:.::.|.|..|    || ::..||:.:.|:|:
 Worm   573 KADAKNSLEEYVYEMRDKVSDQYAEFITPAAADEFRSVLTSTED----WLYDEGEDAERDVYEKR 633

  Fly   620 KKDLEAIVQPVIAKLYQGAGGAPPPEGGDDADLK 653
            ..:|:|:..||:.:..:.....|..:..|.:.::
 Worm   634 LSELKAVGTPVVERYRESETRKPAFDSFDQSIMR 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-3NP_511132.2 PTZ00009 32..643 CDD:240227 193/670 (29%)
hsp-110NP_498868.1 HSP70 3..650 CDD:394970 194/664 (29%)

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