DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-3 and Hspa4

DIOPT Version :9

Sequence 1:NP_001285139.1 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_032326.3 Gene:Hspa4 / 15525 MGIID:1342292 Length:842 Species:Mus musculus


Alignment Length:708 Identity:204/708 - (28%)
Similarity:345/708 - (48%) Gaps:129/708 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTTNPENTVF 94
            :|:|||||.....|.|.:.|.:|.|||:..:|.||:.|:| ....|.||.|||:|:.:|.:|||.
Mouse     2 SVVGIDLGFQSCYVAVARAGGIETIANEYSDRCTPACVSF-GPKNRSIGAAAKSQVISNAKNTVQ 65

  Fly    95 DAKRLIGREWSDTNVQHDIKFFPFKVVEKNSKPHISVDTSQ------GAKV--------FAPEEI 145
            ..||..||.:||          ||...||:   :::.|..|      |.||        |..|::
Mouse    66 GFKRFHGRAFSD----------PFVEAEKS---NLAYDIVQLPTGLTGIKVTYMEEERNFTTEQV 117

  Fly   146 SAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQVMRIINEPTAAAIAYG 210
            :||:|.|:|||||:.|.|.|...||:||:::.||:|::..||..||||..:|::||.||.|:|||
Mouse   118 TAMLLSKLKETAESVLKKPVVDCVVSVPSFYTDAERRSVMDATQIAGLNCLRLMNETTAVALAYG 182

  Fly   211 LDK------KEGEKNVLVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKL 269
            :.|      :|..:||:..|:|...:.||:...:.|..:|:||..||.|||..||:.:::||.:.
Mouse   183 IYKQDLPALEEKPRNVVFVDMGHSAYQVSVCAFNKGKLKVLATAFDTTLGGRKFDEVLVNHFCEE 247

  Fly   270 YKKKKGKDIRKDNRAVQKLRREVEKAKRALS-GSHQVRIEIESFFEGDDFSETLTRAKFEELNLD 333
            :.||...||:...||:.:|.:|.||.|:.:| .:..:.:.||.|....|.|.|:.|.||.|:..|
Mouse   248 FGKKYKLDIKSKIRALLRLSQECEKLKKLMSANASDLPLSIECFMNDIDVSGTMNRGKFLEMCDD 312

  Fly   334 LFRSTLKPVQKVLEDADMNKKDVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGA 398
            |......|::.|||.:.:.|:|::.:.:|||:||||.|::.:..|| |||.|..:|.||||..|.
Mouse   313 LLARVEPPLRSVLEQSKLKKEDIYAVEIVGGATRIPAVKEKISKFF-GKELSTTLNADEAVTRGC 376

  Fly   399 AVQAGVLSGEQDTDAIVLLDVNPLTMGIE-----TVGGVMTKLIPRNTVIPTKKSQVFSTASDNQ 458
            |:|..:||.........:.||.|..:.:.     ..|....::.|:|...|..|...|.    .:
Mouse   377 ALQCAILSPAFKVREFSITDVVPYPISLRWNSPAEEGLSDCEVFPKNHAAPFSKVLTFY----RK 437

  Fly   459 HTVTIQV-YEGERPMTKDNHLLGKFDLTGIPPAPRG-IPQIEVSFEIDANGILQVSA-------- 513
            ...|::. |...:.:...:..:.:|.:..:.|...| ..:::|...::.:||..||:        
Mouse   438 EPFTLEAYYSSPQDLPYPDPAIAQFSVQKVTPQSDGSSSKVKVKVRVNVHGIFSVSSAALVEVHK 502

  Fly   514 ---------EDKGTGNKEKIVI---------------TNDQNRLTPED----------------- 537
                     .|:....:||:.:               |..:|:...|:                 
Mouse   503 SEESEEPMETDQNAKEEEKMQVDQEEPHTEEQQQQPQTPAENKAESEEMETSQAGSKDKKTDQPP 567

  Fly   538 -----------------------IDRMI-----RDAEKFADEDKKLKERVESRNELESYAYSLKN 574
                                   :||.:     .:..|...:||..|||.:::|.:|.|.|.:::
Mouse   568 QAKKAKVKTSTVDLPIESQLLWQLDREMLGLYTENEGKMIMQDKLEKERNDAKNAVEEYVYEMRD 632

  Fly   575 QI-GDKDKLGAKLSDDEKNKLESAIDESIKWLEQNPDADPEE-YKKQKKDLEAIVQPV 630
            :: |:.:|.   :|:|::|.....::::..||.::.:..|:: |..:..:|:::.||:
Mouse   633 KLSGEYEKF---VSEDDRNTFTLKLEDTENWLYEDGEDQPKQVYVDKLAELKSLGQPI 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-3NP_001285139.1 HSPA5-like_NBD 29..403 CDD:212681 153/393 (39%)
PTZ00009 32..643 CDD:240227 203/706 (29%)
Hspa4NP_032326.3 HSPA4_NBD 2..384 CDD:212687 153/396 (39%)
HSP70 3..609 CDD:278441 183/624 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..577 6/76 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 784..842
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.