DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-3 and hspa2

DIOPT Version :9

Sequence 1:NP_001285139.1 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster
Sequence 2:XP_004917261.1 Gene:hspa2 / 100496396 XenbaseID:XB-GENE-992125 Length:633 Species:Xenopus tropicalis


Alignment Length:623 Identity:393/623 - (63%)
Similarity:491/623 - (78%) Gaps:11/623 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTTNPENTVFDA 96
            :|||||||||||||:::|:||||||:||||.|||||||| |.|||||||||||:..||.||:|||
 Frog     8 VGIDLGTTYSCVGVFQHGKVEIIANEQGNRTTPSYVAFT-DTERLIGDAAKNQVALNPANTIFDA 71

  Fly    97 KRLIGREWSDTNVQHDIKFFPFKVVEKNSKPHISVDTSQGAKVFAPEEISAMVLGKMKETAEAYL 161
            ||||||.:.|..||.|:|.:||.||....||.:.|:.....|.|.|||||:|||.||||.|||||
 Frog    72 KRLIGRRFDDPTVQADMKHWPFTVVSDGGKPKVKVEFKGENKTFFPEEISSMVLSKMKEVAEAYL 136

  Fly   162 GKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQVMRIINEPTAAAIAYGLDKK---EGEKNVLVF 223
            |.||.:||:||||||||:|||||||||||:|:.|:||||||||||||||||||   .||.|||:|
 Frog   137 GVKVPNAVITVPAYFNDSQRQATKDAGVISGINVLRIINEPTAAAIAYGLDKKGAGHGETNVLIF 201

  Fly   224 DLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKLYKKKKGKDIRKDNRAVQKL 288
            ||||||||||:||||.|:|||.:|.|||||||||||.|::.||::.:|:|..|||..:.|||::|
 Frog   202 DLGGGTFDVSVLTIDGGIFEVKSTAGDTHLGGEDFDNRMVAHFVEEFKRKNKKDISGNKRAVRRL 266

  Fly   289 RREVEKAKRALSGSHQVRIEIESFFEGDDFSETLTRAKFEELNLDLFRSTLKPVQKVLEDADMNK 353
            |...|:|||.||.|.|..:||:|.:||.||...:|||:||||..||||.||:||:|.|.||.::|
 Frog   267 RTACERAKRTLSSSTQASLEIDSLYEGADFYTAITRARFEELCADLFRGTLEPVEKALRDAKLDK 331

  Fly   354 KDVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGAAVQAGVLSGEQ--DTDAIVL 416
            ..:.|||||||||||||||:|::|||.|:|.::.|||||||||||||||.:|||::  :...::|
 Frog   332 AQIREIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILSGDKSHNVQDLLL 396

  Fly   417 LDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQVFSTASDNQHTVTIQVYEGERPMTKDNHLLGK 481
            |||.||::||||.|||||.||.|||.||:|::|.|:|.||||.:|.:|||||||.||:||:||||
 Frog   397 LDVAPLSLGIETAGGVMTALIKRNTTIPSKQTQTFTTYSDNQSSVLVQVYEGERAMTRDNNLLGK 461

  Fly   482 FDLTGIPPAPRGIPQIEVSFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPEDIDRMIRDAE 546
            ||||||||||||:|||||:|:|||||||.|:|.||.||.:.||.||||:.||:.|||:||:.|||
 Frog   462 FDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLSKEDIERMVNDAE 526

  Fly   547 KFADEDKKLKERVESRNELESYAYSLKNQIGDKDKLGAKLSDDEKNKLESAIDESIKWLEQNPDA 611
            |:..||:..::||.::|.||||||.:| |..:.:||..|||:.||:::.....|.|.|||:|..|
 Frog   527 KYKAEDELNRDRVAAKNGLESYAYHIK-QTAEDEKLKGKLSEKEKSQILDKCKEVIDWLEKNQMA 590

  Fly   612 DPEEYKKQKKDLEAIVQPVIAKLYQGAGGAPPP--EGG 647
            :.:|::.::|:||.:..|:|.||||  ||||.|  .||
 Frog   591 EKDEFEHKQKELEKVCNPIITKLYQ--GGAPNPGTAGG 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-3NP_001285139.1 HSPA5-like_NBD 29..403 CDD:212681 251/373 (67%)
PTZ00009 32..643 CDD:240227 389/615 (63%)
hspa2XP_004917261.1 PTZ00009 2..633 CDD:240227 393/623 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.