DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-3 and hspa1b

DIOPT Version :9

Sequence 1:NP_001285139.1 Gene:Hsc70-3 / 32133 FlyBaseID:FBgn0001218 Length:656 Species:Drosophila melanogaster
Sequence 2:XP_002937685.2 Gene:hspa1b / 100485441 XenbaseID:XB-GENE-5915622 Length:643 Species:Xenopus tropicalis


Alignment Length:632 Identity:396/632 - (62%)
Similarity:502/632 - (79%) Gaps:9/632 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTTNPENTV 93
            |..||||||||||||||:::|:|||||||||||.|||||||| |.|||||||||||:..||.|||
 Frog     5 GVAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVALNPHNTV 68

  Fly    94 FDAKRLIGREWSDTNVQHDIKFFPFKVVEKNSKPHISVDTSQGAKVFAPEEISAMVLGKMKETAE 158
            |||||||||::.:..||.|:|.:||||:....||.::|:.....|.|:|||||:|||.|||||||
 Frog    69 FDAKRLIGRKYDEPVVQSDMKHWPFKVISDGGKPKVTVEYKGEGKSFSPEEISSMVLTKMKETAE 133

  Fly   159 AYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQVMRIINEPTAAAIAYGLDKK-EGEKNVLV 222
            ||||.|||:||:|||| |||:||||||||||||||.|:|||||||||||||||||. .||:|:|:
 Frog   134 AYLGYKVTNAVITVPAXFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKSGRGERNILI 198

  Fly   223 FDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKLYKKKKGKDIRKDNRAVQK 287
            |||||||||||:||||:|:|||.||.|||||||||||.|:::||::.:|:|..|||..:.||:::
 Frog   199 FDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRMVNHFVEEFKRKHKKDISPNKRALRR 263

  Fly   288 LRREVEKAKRALSGSHQVRIEIESFFEGDDFSETLTRAKFEELNLDLFRSTLKPVQKVLEDADMN 352
            ||...|:|||.||.|.|..|||:|.|||.||..::|||:||||..||||.||:||:|.:.||.::
 Frog   264 LRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELCADLFRGTLEPVEKAMRDAKLD 328

  Fly   353 KKDVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDEAVAYGAAVQAGVLSGE--QDTDAIV 415
            |..:||||||||||||||||:|::|||.|||.::.|||||||||||||||.:|.|:  ::...::
 Frog   329 KSQIHEIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILMGDKSENVQDLL 393

  Fly   416 LLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQVFSTASDNQHTVTIQVYEGERPMTKDNHLLG 480
            ||||.||::|:||.|||||.||.|||.||||::|.|:|.||||..|.||||||||.|||||:|||
 Frog   394 LLDVAPLSLGLETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLG 458

  Fly   481 KFDLTGIPPAPRGIPQIEVSFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPEDIDRMIRDA 545
            |||||||||||||:|||||:|:|||||||.|||.||.:|.:.||.||||:.||:.|:|:||:::|
 Frog   459 KFDLTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSSGKQNKITITNDKGRLSKEEIERMLQEA 523

  Fly   546 EKFADEDKKLKERVESRNELESYAYSLKNQIGDKDKLGAKLSDDEKNKLESAIDESIKWLEQNPD 610
            :|:..:|::.:|::.::|.|||||:::|:.:.| :.:..|:||::|..:.....|.|.|||||..
 Frog   524 DKYKADDEQQREKIAAKNSLESYAFNMKSTVED-NNIKDKISDNDKKSILDKCQEVISWLEQNQL 587

  Fly   611 ADPEEYKKQKKDLEAIVQPVIAKLYQGA--GGAP--PPEGGDDADLK 653
            |:.|||..::|:||.:..|:|.|||||.  ||.|  .|..|..|:.|
 Frog   588 AEKEEYTHKQKELEKLCNPIITKLYQGGMPGGMPGGMPGAGCTAEPK 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-3NP_001285139.1 HSPA5-like_NBD 29..403 CDD:212681 258/374 (69%)
PTZ00009 32..643 CDD:240227 391/617 (63%)
hspa1bXP_002937685.2 PTZ00009 2..643 CDD:240227 396/632 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53894
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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