DRSC/TRiP Functional Genomics Resources

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Protein Alignment CkIIbeta and csnk2b

DIOPT Version :9

Sequence 1:NP_996415.1 Gene:CkIIbeta / 32132 FlyBaseID:FBgn0000259 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001005081.1 Gene:csnk2b / 448656 XenbaseID:XB-GENE-487924 Length:215 Species:Xenopus tropicalis


Alignment Length:215 Identity:190/215 - (88%)
Similarity:206/215 - (95%) Gaps:0/215 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSSEEVSWVTWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPNYRQALDMILDLEPEDELEDN 65
            |||||||||::|||||||||||||||||||||||||||||||||:|||||||||||||::|||||
 Frog     1 MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDN 65

  Fly    66 PLQSDMTEQAAEMLYGLIHARYILTNRGIAQMIEKYQTGDFGHCPRVYCESQPMLPLGLSDIPGE 130
            |.|||:.|||||||||||||||||||||||||:||||.||||:|||||||:|||||:||||||||
 Frog    66 PNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGE 130

  Fly   131 AMVKTYCPKCIDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPTNQFVPRLYGFKIHSL 195
            ||||.|||||:||||||||||||||||||||||||||||||||||||||.|||||||||||||.:
 Frog   131 AMVKLYCPKCMDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIHPM 195

  Fly   196 AYQIQLQAAANFKMPLRAQR 215
            |||:|||||:|||.|::..|
 Frog   196 AYQLQLQAASNFKSPVKTMR 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CkIIbetaNP_996415.1 CK_II_beta 8..191 CDD:198153 166/182 (91%)
csnk2bNP_001005081.1 CK_II_beta 8..191 CDD:198153 166/182 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 374 1.000 Domainoid score I874
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55572
Inparanoid 1 1.050 418 1.000 Inparanoid score I1769
OMA 1 1.010 - - QHG53662
OrthoDB 1 1.010 - - D1335521at2759
OrthoFinder 1 1.000 - - FOG0001997
OrthoInspector 1 1.000 - - oto104414
Panther 1 1.100 - - LDO PTHR11740
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1673
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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