DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CkIIbeta and kin-10

DIOPT Version :9

Sequence 1:NP_996415.1 Gene:CkIIbeta / 32132 FlyBaseID:FBgn0000259 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001379151.1 Gene:kin-10 / 172610 WormBaseID:WBGene00002196 Length:235 Species:Caenorhabditis elegans


Alignment Length:227 Identity:165/227 - (72%)
Similarity:188/227 - (82%) Gaps:11/227 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSSEEVSWVTWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPNYRQALDMILDLEPEDELEDN 65
            |||||||||:|||||||||||||||||:||||:|||||||||||.|||||||||||||||::|||
 Worm     1 MSSSEEVSWITWFCGLRGNEFFCEVDEEYIQDRFNLTGLNEQVPKYRQALDMILDLEPEDDIEDN 65

  Fly    66 PLQSDMTEQAAEMLYGLIHARYILTNRGIAQMIEKYQTGDFGHCPRVYCESQPMLPLGLSDIPGE 130
            ...:|:.||||||||||||||||||||||:||:||::..|||.|||||||:|||||:||||:|||
 Worm    66 ATNTDLVEQAAEMLYGLIHARYILTNRGISQMVEKWRDHDFGVCPRVYCENQPMLPIGLSDVPGE 130

  Fly   131 AMVKTYCPKCIDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPTNQFVPRLYGFKIHSL 195
            ||||.|||:|.||:.|:||||.||||:|||||||||||.|||:.||:||..||||:|||||||.:
 Worm   131 AMVKLYCPRCNDVFVPRSSRHQHTDGSYFGTGFPHMLFFVHPDLRPRRPVTQFVPKLYGFKIHPV 195

  Fly   196 AYQIQ-----------LQAAANFKMPLRAQRG 216
            ||..|           :.||.|...|...|.|
 Worm   196 AYGGQEGNSGGNTANNVAAAQNNTTPAGQQSG 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CkIIbetaNP_996415.1 CK_II_beta 8..191 CDD:198153 145/182 (80%)
kin-10NP_001379151.1 CK_II_beta 8..191 CDD:198153 145/182 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159111
Domainoid 1 1.000 329 1.000 Domainoid score I625
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55572
Inparanoid 1 1.050 350 1.000 Inparanoid score I1342
Isobase 1 0.950 - 0.772836 Normalized mean entropy S292
OMA 1 1.010 - - QHG53662
OrthoDB 1 1.010 - - D1335521at2759
OrthoFinder 1 1.000 - - FOG0001997
OrthoInspector 1 1.000 - - oto19185
orthoMCL 1 0.900 - - OOG6_100687
Panther 1 1.100 - - LDO PTHR11740
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R251
SonicParanoid 1 1.000 - - X1673
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.890

Return to query results.
Submit another query.