DRSC/TRiP Functional Genomics Resources

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Protein Alignment CkIIbeta and Csnk2b

DIOPT Version :9

Sequence 1:NP_996415.1 Gene:CkIIbeta / 32132 FlyBaseID:FBgn0000259 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001290405.1 Gene:Csnk2b / 13001 MGIID:88548 Length:257 Species:Mus musculus


Alignment Length:240 Identity:135/240 - (56%)
Similarity:162/240 - (67%) Gaps:34/240 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSSEEVSWVTWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPNYRQALDMILDLEPEDELEDN 65
            |||||||||::|||||||||||||||||||||||||||||||||:|||||||||||||::|||||
Mouse     1 MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDN 65

  Fly    66 PLQSDMTEQAAEMLYGLIHARYILTNRGIAQMIEKYQTGDFGHCPRVYCESQPMLPLGLSDIPGE 130
            |.|||:.|||||||||||||||||||||||||:||||.||||:|||||||:|||||:|   ||| 
Mouse    66 PNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPMLPIG---IPG- 126

  Fly   131 AMVKTYCPKCIDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPTNQFVPRLYGFKIHSL 195
              :::.|      .:|:..||...  .:..|..|.:...||.:.....|..:.:.| :.|..|:|
Mouse   127 --LQSGC------LSPRPFRHPRR--GHGETLLPQVHGRVHTQVLQTPPHGRRILR-HWFPSHAL 180

  Fly   196 --AYQIQLQAAAN--------FK---------MPLRAQRGQPPKD 221
              |.::..||...        |:         .|.|.|..:|.:|
Mouse   181 HGASRVPAQATCQPVCTQALWFQDPSNGLPAAAPSRQQLQEPSQD 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CkIIbetaNP_996415.1 CK_II_beta 8..191 CDD:198153 116/182 (64%)
Csnk2bNP_001290405.1 CK_II_beta 8..>129 CDD:198153 106/126 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836839
Domainoid 1 1.000 374 1.000 Domainoid score I880
eggNOG 1 0.900 - - E1_COG5041
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55572
Inparanoid 1 1.050 416 1.000 Inparanoid score I1801
Isobase 1 0.950 - 0.772836 Normalized mean entropy S292
OMA 1 1.010 - - QHG53662
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001997
OrthoInspector 1 1.000 - - oto94205
orthoMCL 1 0.900 - - OOG6_100687
Panther 1 1.100 - - LDO PTHR11740
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R251
SonicParanoid 1 1.000 - - X1673
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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