DRSC/TRiP Functional Genomics Resources

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Protein Alignment Karl and TIL

DIOPT Version :10

Sequence 1:NP_572748.2 Gene:Karl / 32131 FlyBaseID:FBgn0030334 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_200615.1 Gene:TIL / 835919 AraportID:AT5G58070 Length:186 Species:Arabidopsis thaliana


Alignment Length:173 Identity:33/173 - (19%)
Similarity:60/173 - (34%) Gaps:46/173 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 IKNFDLERMMGCWHVVQYYASTEELPEYACMRSHFSFSKEDQHITMNFSY-----------IFAE 112
            :|..::||.||.|:.:..:.|..:.......|:.::.:.:.....:|.::           .:..
plant    10 VKGLNVERYMGRWYEIASFPSRFQPKNGVDTRATYTLNPDGTIHVLNETWSNGKRGFIEGSAYKA 74

  Fly   113 DPLREKLVGNITWMIPKFQE--PGHWQHTEDIYEGIYNTYVLDTDYDTWGLVMHCAEKKKQPRYL 175
            ||..::....:.:.:|.|..  |         ..|.|....:|.||      .|....:....||
plant    75 DPKSDEAKLKVKFYVPPFLPIIP---------VTGDYWVLYIDPDY------QHALIGQPSRSYL 124

  Fly   176 SALLLSRKTSLADN--------------EISFLRGKLPQDIDT 204
              .:|||...:.:.              :||.|. |.||. ||
plant   125 --WILSRTAQMEEETYKQLVEKAVEEGYDISKLH-KTPQS-DT 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KarlNP_572748.2 lipocalin_FABP 66..182 CDD:381182 21/128 (16%)
TILNP_200615.1 Lipocalin_2 13..160 CDD:400495 28/164 (17%)

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