DRSC/TRiP Functional Genomics Resources

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Protein Alignment Karl and LOC298111

DIOPT Version :9

Sequence 1:NP_001285137.1 Gene:Karl / 32131 FlyBaseID:FBgn0030334 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001019419.1 Gene:LOC298111 / 298111 RGDID:1593272 Length:181 Species:Rattus norvegicus


Alignment Length:217 Identity:46/217 - (21%)
Similarity:76/217 - (35%) Gaps:61/217 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VLLAPVGANLWTRHNSNAYQTRRRSGPSNRCPKVGAIKNFDLERMMGCW-HVVQYYASTEELPEY 86
            :||..:|..|...|...|...|               .|.|::::.|.| .:|......|::.|.
  Rat     5 LLLLCLGLTLVCGHAEEANSER---------------GNLDVDKLNGDWFSIVVASNKREKIEEN 54

  Fly    87 ACMRSHFSFSKEDQHI-----TMNFSYIFAEDPLREKLVGNITWMIPKFQEPGHWQHTEDIYEGI 146
            ..||...      |||     ::.|.....|:....||. ::.:..||..|    ...|  |:| 
  Rat    55 GSMRVFM------QHIDVLENSLGFKLCIKENGECRKLY-SVAYKTPKIGE----YFLE--YDG- 105

  Fly   147 YNTY-VLDTDYDTWGLVMHCAEKKKQPRYLSALLLSRKTSLADNEISFLRGKLPQDIDTSFMFNI 210
            .||: :|.|||:.: ::.|.........:....|..|...|:            .||...|    
  Rat   106 GNTFTILKTDYERY-VMFHLVNVNNGEAFQLMELYGRTKDLS------------SDIKEKF---- 153

  Fly   211 GQESC-------DNLMESSRDD 225
             .:.|       ||:::.::.|
  Rat   154 -AKLCEAHGITRDNIIDLTKTD 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KarlNP_001285137.1 None
LOC298111NP_001019419.1 Lipocalin 35..174 CDD:278490 36/170 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D558802at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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