DRSC/TRiP Functional Genomics Resources

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Protein Alignment Karl and LOC259244

DIOPT Version :9

Sequence 1:NP_001285137.1 Gene:Karl / 32131 FlyBaseID:FBgn0030334 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_671745.1 Gene:LOC259244 / 259244 RGDID:708501 Length:181 Species:Rattus norvegicus


Alignment Length:228 Identity:47/228 - (20%)
Similarity:76/228 - (33%) Gaps:83/228 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VLLAPVGANLWTRHNSNAYQTRRRSGPSNRCPKVGAIKNFDLERMMGCW-HVVQYYASTEELPEY 86
            :||..:|..|...|...|..|   :|            |.|::::.|.| .:|......|::.|.
  Rat     5 LLLLCLGLTLVCGHAEEASST---TG------------NRDVDKLNGDWFSIVVASDKREKIEEN 54

  Fly    87 ACMR---SH---------FSFSKEDQHITMNFSYIFAEDPLREKLVGNITWMIPK----FQEPGH 135
            ..||   .|         |.|..::..:...||.              :.:..||    |.|   
  Rat    55 GSMRVFVQHIRVLENSLAFKFRIKENGVCTEFSL--------------VAYKTPKDGEYFVE--- 102

  Fly   136 WQHTEDIYEGIYNTY-VLDTDYDTWGLVMHCAEKKKQPRYLSALLLSRKTSLADNEISFLRGKLP 199
                   |:| .||: :|.||||.: ::.|....|....:....|..|...|:            
  Rat   103 -------YDG-GNTFTILKTDYDRY-VMFHLVNFKNGETFQLMELYGRTKDLS------------ 146

  Fly   200 QDIDTSFMFNIGQESC-------DNLMESSRDD 225
            .||...|     .:.|       ||:::.::.|
  Rat   147 SDIKEKF-----AKLCVAHGITRDNIIDLTKTD 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KarlNP_001285137.1 None
LOC259244NP_671745.1 lipocalin_MUP-like 24..181 CDD:381203 41/209 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D558802at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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