Protein Alignment Karl and Apod

DIOPT Version :10

• Sequence 1: NP_572748.2
• Gene: Karl / 32131
• FlyBaseID: FBgn0030334
• Length: 266
• Species: Drosophila melanogaster
• Sequence 2: XP_038943926.1
• Gene: Apod / 25239
• RGDID: 2137
• Length: 204
• Species: Rattus norvegicus
• Alignment Length: 226
• Identity: 49/226 - (21%)
• Similarity: 84/226 - (37%)
• Gaps: 59/226 - (26%)

  Fly    15 AVLIIILDVLLAPVGANLWTRHNSNAYQTRRRSGPSNRCPKVGAIKNFDLERMMGCWHVVQYYAS 79
            |.::::|..|     |.|:|       .|..:|....:||.....:|||:::.:|.|:.:
  Rat    17 ATMLLLLATL-----AGLFT-------TTEGQSFHLGKCPSPPVQENFDVKKYLGRWYEI----- 64

  Fly    80 TEELPEYACMRSHFSFSKEDQHITMNFSYIFAEDPLREKLVGNITWMIPKFQEPGHWQHTEDIYE 144
             |::|        .||.| ...|..|:|       |.|.  |||..:..:.:..|.....|.  |
  Rat    65 -EKIP--------VSFEK-GNCIQANYS-------LMEN--GNIKVLNKELRPDGTLNQVEG--E 108

  Fly   145 GIYNT--------------------YVLDTDYDTWGLVMHCAEKKKQPRYLSALLLSRKTSLADN 189
            ...:.                    ::|.|||:::.||..|.............:|.|...|...
  Rat   109 AKQSNMSEPAKLEVQFFSLMPPAPYWILATDYESYALVYSCTTFFWFFHVDYVWILGRNPYLPPE 173

  Fly   190 EISFLRGKL-PQDIDTSFMFNIGQESCDNLM 219
            .|::|:..| ..|||.:.:....|.:|.:.:
  Rat   174 TITYLKYILTSNDIDIAKITTTDQANCPDFL 204

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Karl	NP_572748.2	lipocalin_FABP	66..182	CDD:381182	26/135 (19%)
Apod	XP_038943926.1	lipocalin_apoD-like	40..197	CDD:381212	39/182 (21%)