DRSC/TRiP Functional Genomics Resources

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Protein Alignment Karl and Lcn11

DIOPT Version :9

Sequence 1:NP_001285137.1 Gene:Karl / 32131 FlyBaseID:FBgn0030334 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001093925.1 Gene:Lcn11 / 227630 MGIID:2684955 Length:178 Species:Mus musculus


Alignment Length:162 Identity:37/162 - (22%)
Similarity:60/162 - (37%) Gaps:47/162 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 AIKNFDLERMMGCWHVVQYYAST-----EELPEYACMRSHFSFSKEDQHITMNFSYIFAEDPLRE 117
            |:::|..|::.|.||.:: .|||     ||...|.|..:........   .:|.:|...:|   .
Mouse    24 ALQDFHPEQVTGPWHTLK-LASTDRSLIEEGGAYRCFMTDIVLLDNG---NLNVTYFHRKD---G 81

  Fly   118 KLVGNITWMIPKFQEPGHWQHTEDIYEGIYN-TYV-----------------------------L 152
            |.|... ::..|...||  |:|.: |:|..: |:|                             |
Mouse    82 KCVKEF-YIAEKTDTPG--QYTFE-YQGRNSLTFVHVTEDFAIMDLENQSEGGTTIVIEFHGRSL 142

  Fly   153 DTDYDTW-GLVMHCAEKKKQPRYLSALLLSRK 183
            .||...| ..::|...:...|..:..|.|||:
Mouse   143 STDELGWERYLVHTRRRGIAPENIVDLSLSRR 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KarlNP_001285137.1 None
Lcn11NP_001093925.1 Lipocalin 34..170 CDD:278490 30/146 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D558802at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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