DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Karl and Karl

DIOPT Version :10

Sequence 1:NP_572748.2 Gene:Karl / 32131 FlyBaseID:FBgn0030334 Length:266 Species:Drosophila melanogaster
Sequence 2:XP_061498293.1 Gene:Karl / 1272384 VectorBaseID:AGAMI1_005895 Length:282 Species:Anopheles gambiae


Alignment Length:238 Identity:116/238 - (48%)
Similarity:150/238 - (63%) Gaps:31/238 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RIMGRNGSL----------LLTAVLIIILDVLLAPVGANLWTRHNSNAYQTRRRSGPSNRCPKVG 57
            |:.||:..:          ||.|:|:::|  ||...||.          |..||...::|||||.
Mosquito    58 RVSGRDSMVRVTLHARSCCLLVALLLLLL--LLVDDGAG----------QIPRRRPRNDRCPKVR 110

  Fly    58 AIKNFDLERMMGCWHVVQYYASTEELPEYACMRSHFSFSKEDQHITMNFSYIFAEDPLREKLVGN 122
            |::||.|..|||.|:|:||:||||..|||.||||  ||...|.::||||:|:|.:|||.....||
Mosquito   111 AMRNFGLNAMMGSWYVIQYFASTEMFPEYGCMRS--SFVTSDGYVTMNFTYVFLDDPLATFQQGN 173

  Fly   123 ITWMIPKFQEPGHWQHTEDIYEGIYNTYVLDTDYDTWGLVMHCAEKKKQPRYLSALLLSRKTSLA 187
            |||:||.:.:|.||.|.|..||.||||||:||||.:|.|:||||||.|..:|||||:|:|:.:|.
Mosquito   174 ITWIIPNYGQPAHWVHAESSYEEIYNTYVIDTDYRSWALIMHCAEKTKSQKYLSALMLAREPTLG 238

  Fly   188 DNEISFLRGKLPQ-DIDTSFMFNIGQESCDNLMESSRDDPLAY 229
            .|.|:|||.|||: |||...||.|.|.:|      :|.||.||
Mosquito   239 QNVINFLREKLPRYDIDVENMFPIPQTNC------TRMDPNAY 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KarlNP_572748.2 lipocalin_FABP 66..182 CDD:381182 69/115 (60%)
KarlXP_061498293.1 None

Return to query results.
Submit another query.