DRSC/TRiP Functional Genomics Resources

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Protein Alignment dy and qsm

DIOPT Version :10

Sequence 1:NP_511130.2 Gene:dy / 32130 FlyBaseID:FBgn0004511 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_652049.1 Gene:qsm / 47065 FlyBaseID:FBgn0028622 Length:414 Species:Drosophila melanogaster


Alignment Length:215 Identity:52/215 - (24%)
Similarity:89/215 - (41%) Gaps:44/215 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   409 VKIGQTMTMVLAIKDDDSKFDMLVRNCVAHDGKRAPIQLVDQRGCVTRPKLMSRFTKIKNFGASA 473
            ||.|..:||.:.:.:|.:....|..|.:.........:.:..:||...|.|...|..|     ..
  Fly   202 VKSGTPLTMEINLDEDSAPVYGLGVNYLDVTDTHTSSETLIFKGCTVDPYLFENFNTI-----DG 261

  Fly   474 SVLSYAHFQAFKFPDSMEVHFQCTIQICRYHC-PEQCSAETNLQDVHHLQVGPESQYGPPPQLHV 537
            .:|| |.|:|||||||..|.|:.|:.:|...| ..|||         :.|||    :|...:...
  Fly   262 DILS-AKFKAFKFPDSSYVQFRATVNVCLDKCLGTQCS---------NNQVG----FGRRKREIS 312

  Fly   538 DA---YHVASAI--------GKRRDE--------RRVQRRARAVAEPQVGLNRIIKVVSSGDLTF 583
            .|   |.::.|:        |..::|        |.::...:.:|....|...:.:..:|....|
  Fly   313 SANKVYEISLAMFLQVQDIEGVNKNEVLQLEEKLRELKLANQRLARNSRGNFAMEQTPASAQPAF 377

  Fly   584 AIDDQ-----AGGNGSSTNG 598
            .:|::     :.|:|:::||
  Fly   378 VVDERELGHLSAGSGAASNG 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dyNP_511130.2 ZP 254..513 CDD:214579 33/104 (32%)
qsmNP_652049.1 ZP 30..298 CDD:214579 31/101 (31%)

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