DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9360 and rdh8b

DIOPT Version :10

Sequence 1:NP_572746.1 Gene:CG9360 / 32128 FlyBaseID:FBgn0030332 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_957082.2 Gene:rdh8b / 393761 ZFINID:ZDB-GENE-040426-1759 Length:317 Species:Danio rerio


Alignment Length:236 Identity:57/236 - (24%)
Similarity:101/236 - (42%) Gaps:57/236 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RVAVVTGASSGIG----AACCKDLVSKGLVVVGL--ARREDRL--------QELKASLPADQASR 57
            :|.::||.|||||    ....:|...:..|:..:  .:|:|:|        .:.......|..|.
Zfish     7 KVVLITGCSSGIGLGIAVMLARDKQQRYYVIATMRDLKRQDKLVCAAGDTYGKTLTVCTLDVCSN 71

  Fly    58 FHGRKC-DVSQEQEVIDAFAWIDATLGGADVLVNNAGIVRLG--VGITHEGNGADLRAILDTNVL 119
            ...|:| |..:::.:              |:|:||||:..:|  .|::.:    |:..:.:||..
Zfish    72 ESVRQCVDSVKDRHI--------------DILINNAGVGLVGPVEGLSLD----DMMKVFETNFF 118

  Fly   120 GVSWCTREAFKSLKRRNVNDGHILIVNSVAGHRVINNPGITMG-MYSPSKYAVTALTEVLRQEFH 183
            |.....:|....:|:|  ..|||::::||.|.:     |:... :|:.||:|:....|.|..:. 
Zfish   119 GAVRMIKEVMPDMKKR--RSGHIIVISSVMGLQ-----GVAFNDVYAASKFAIEGFCESLAVQL- 175

  Fly   184 NNKTQTKITSISPGAVDTEIIDKEALVGIPDFPMLRSEDVA 224
             .|....::.|.||.|.||            |.|...:||:
Zfish   176 -LKFNVTMSMIEPGPVHTE------------FEMKMYDDVS 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9360NP_572746.1 Rossmann-fold NAD(P)(+)-binding proteins 1..246 CDD:473865 57/236 (24%)
rdh8bNP_957082.2 type1_17beta-HSD-like_SDR_c 7..264 CDD:187666 57/236 (24%)

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