DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15221 and Sv2b

DIOPT Version :9

Sequence 1:NP_001096957.1 Gene:CG15221 / 32127 FlyBaseID:FBgn0030331 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001103223.1 Gene:Sv2b / 64176 MGIID:1927338 Length:683 Species:Mus musculus


Alignment Length:614 Identity:128/614 - (20%)
Similarity:230/614 - (37%) Gaps:152/614 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GGREENLSEKPR-----PHTFEEAITLTGVGRFHYKLLLICGLCFMGVMVEIMGVSLIMNQMKCD 78
            ||:.:.::|:..     .|.:|..|...|.|||.:.|..:.||..|...|||..||..:...:.|
Mouse    75 GGQADLMAERMEDEEELAHQYETIIDECGHGRFQWTLFFVLGLALMADGVEIFVVSFALPSAEKD 139

  Fly    79 LQPTLNQQGILASAGFLGVVLSSHAMGFLADTWGRATTLRYALCISSVCSIVSAFSVNIWMLIVF 143
            :..:.:::|:|....:||::..:..:|.|||..||...|..:|.|::..:.:|:|.......:..
Mouse   140 MCLSSSKKGMLGLIVYLGMMAGAFILGGLADKLGRKKVLSMSLAINASFASLSSFVQGYGAFLFC 204

  Fly   144 RFLTGFFISGGQACVFSLCGEFHGTGSRIRHVTLLSGFLCMAMIFAPAMAIGILPLRIETIVLG- 207
            |.::|..|.|....||:...||.....|..|::.|..|.....|:|.|||..|:|.......:| 
Mouse   205 RLISGIGIGGSLPIVFAYFSEFLSREKRGEHLSWLGIFWMTGGIYASAMAWSIIPHYGWGFSMGT 269

  Fly   208 -MHFSSWRVLLLANVSIPLLALVGISALPETPKYLLVQGRGDESLEVLRSIFANN---SGRDPSE 268
             .||.||||.::.......:::|.:..:||:|::||..|:.||:..:|:.:...|   .|.....
Mouse   270 NYHFHSWRVFVIVCALPATVSMVALKFMPESPRFLLEMGKHDEAWMILKQVHDTNMRAKGTPEKV 334

  Fly   269 YPVKEVALESGGVSLSDVHG------------FLDAVRLVWHQTVPLFYRARLWHTLNICCIQFI 321
            :.|..:..........::..            |:...:.||...:.........:||.:..:.|.
Mouse   335 FTVSHIKTPKQMDEFIEIQSSTGTWYQRWLVRFMTIFKQVWDNALYCVMGPYRMNTLILAVVWFT 399

  Fly   322 IYFLAQGIFMWFPTIL----DE-----LGTRNGENTLLCTVLQGFNINSSSEDEA---------- 367
            :.....|:.:|||.::    ||     :....||:      :.|..||.:.|::.          
Mouse   400 MALSYYGLTVWFPDMIRYFQDEEYKSKMKVFFGEH------VHGATINFTMENQIHQHGKLVNDK 458

  Fly   368 -------------------------------SSCSVE----VDTSTYQVMII----IAACFV--- 390
                                           .:|::|    .:|..|:...|    |.:.|:   
Mouse   459 FIKMYFKHVLFEDTFFDKCYFEDVTSTDTYFKNCTIESTTFYNTDLYKHKFINCRFINSTFLEQK 523

  Fly   391 -------------VIYL--------------IFAYIIDYMGKKNLLMAWMVLTMICLVALHYVEQ 428
                         :|||              |.|.::|.:|:..::...|:::.:|...|.:   
Mouse   524 EGCHMDFEEDNDFLIYLVSFLGSLSVLPGNIISALLMDRIGRLKMIGGSMLISAVCCFFLFF--- 585

  Fly   429 FALVVIALTVVMAIGN------------CG------GLVSTIAMEFYPTHINAMGMCFIMMVGRL 475
                          ||            ||      ..:..|.:|.|||:..|.....:..:.:.
Mouse   586 --------------GNSESAMIGWQCLFCGTSIAAWNALDVITVELYPTNQRATAFGILNGLCKF 636

  Fly   476 GAVVGSNILGRLL-FASCDPIFWALLALV 503
            ||::|:.|....: .....||..|..:||
Mouse   637 GAILGNTIFASFVGITKVVPILLAAASLV 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15221NP_001096957.1 2A0115 36..488 CDD:273327 118/574 (21%)
MFS 51..488 CDD:119392 112/559 (20%)
Sv2bNP_001103223.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..73
synapt_SV2 8..683 CDD:130366 128/614 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208328at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8715
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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