DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15221 and svopa

DIOPT Version :9

Sequence 1:NP_001096957.1 Gene:CG15221 / 32127 FlyBaseID:FBgn0030331 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_005165254.1 Gene:svopa / 559162 ZFINID:ZDB-GENE-060526-336 Length:549 Species:Danio rerio


Alignment Length:545 Identity:132/545 - (24%)
Similarity:229/545 - (42%) Gaps:85/545 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CDR-EFANMEGGRE--ENLS-----------EKPRPHTF--EEAITLTGVGRFHYKLLLICGLCF 58
            |.| |...:||||.  |::|           ..|...||  |:|:...|.|.|.:||.::.||.:
Zfish    30 CGREEVLQVEGGRTDMESVSLADGAPVPREFANPTDDTFMVEDAVEAIGFGTFQWKLSILTGLSW 94

  Fly    59 MGVMVEIMGVSLIMNQMKCDLQPTLNQQGILASAGFLGVVLSSHAMGFLADTWGRATTLRYALCI 123
            |...:|:|.:|::..|:.|:......:..:|.|..|:|:::||...|.::|.:||.|.|:.::..
Zfish    95 MADAMEMMILSILAPQLHCEWALPSWEVALLTSVVFIGMMISSSLWGNISDKYGRKTGLKMSVLW 159

  Fly   124 SSVCSIVSAFSVNIWMLIVFRFLTGFFISGGQACVFSLCGEFHGTGSRIRHVTLLSGFLCMAMIF 188
            :....|:|||:.....::..|.|.||.|.|....| :|..||....||...:.|:..|..:..:|
Zfish   160 TLFYGILSAFAPIYGWILFLRALVGFGIGGAPQSV-TLYAEFLPMRSRATCILLIEIFWALGTVF 223

  Fly   189 APAMAIGILPLRIETIVLGMHFSSWRVLLLANVSIPLLALVGISA-LPETPKYLLVQGRGDESLE 252
            ...:||.::|      .||     || .|||..:|||.....:.. |||:.:|.::.|..:::|.
Zfish   224 EVLLAILVMP------TLG-----WR-WLLALSTIPLFIFAFLCFWLPESARYDVLTGNQEKALN 276

  Fly   253 VLRSIFANNSGRDPSEYPVKEVALESGGVSLSDVHGFLDAVRLVWHQTVPLFYRARLWHTLNICC 317
            .|:.|.|.|:...|....:  ||.:.....:.|                 ||.....|.|:.:..
Zfish   277 TLKRIAAENNVPMPLGKLI--VARQEDRGKIQD-----------------LFSPHFRWTTVLLWF 322

  Fly   318 IQFIIYFLAQGIFMWFPTILDELGTRNGENTLLCTVLQGFNINSSSEDEASSCSVE---VDTSTY 379
            |.|...|...|:.:....:..|.|...|..            .|..|   ..||:|   :::..|
Zfish   323 IWFSNAFSYYGVVLLTTELFQEGGVCGGAK------------GSKME---PGCSLECKYLNSDDY 372

  Fly   380 QVMIIIAACFVVIYLIFAYIIDYMGKKNLLMAWMVLTMICLVALHYVEQFALVVIALTVVMAIGN 444
            :.::..........|:..:.||.:|::..:.....:..:|:|.|:    ..:...:|||.:.|..
Zfish   373 KDLLWTTLSEFPGLLVTLWAIDRLGRRKTMALCFFVFSLCIVPLY----SCVGRTSLTVFIFIAR 433

  Fly   445 ---CGGLVSTIAM--EFYPTHINAMGMCFIMMVGRLGAVVGSNILGRLLFAS---------CDPI 495
               .||..:....  |.|||...|:|:.....:.|:||::...:...:|.:|         |..:
Zfish   434 AFIAGGFQAAYVYTPEVYPTATRALGLGTSSGMARVGALITPFVAQVMLESSVYLTLSVYCCCCL 498

  Fly   496 FWALLALVVLLCTLGYFLPEKARSQ 520
            ..|:.:..:.:.|.|..|.|.:..:
Zfish   499 LAAIASCALPIETTGRGLQESSHRE 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15221NP_001096957.1 2A0115 36..488 CDD:273327 111/460 (24%)
MFS 51..488 CDD:119392 105/445 (24%)
svopaXP_005165254.1 2A0115 82..482 CDD:273327 108/450 (24%)
MFS 88..508 CDD:119392 109/470 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.