DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15221 and Slc22a13

DIOPT Version :9

Sequence 1:NP_001096957.1 Gene:CG15221 / 32127 FlyBaseID:FBgn0030331 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001119757.1 Gene:Slc22a13 / 316062 RGDID:1306840 Length:551 Species:Rattus norvegicus


Alignment Length:451 Identity:99/451 - (21%)
Similarity:168/451 - (37%) Gaps:112/451 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 GVVLSSHAMGFLADTWGRATTLRYALCISSVCSIVSAF--SVNIWMLIVFRFLT---GFFISGGQ 155
            |:::.:...|.:.|..||..:|...|.:|.:.|:.:||  |..::|.:.|...|   ||.:|.. 
  Rat   147 GLLVGALVFGPVCDWIGRRPSLLMQLLLSGIASMATAFVSSFELYMTLRFALATANAGFLLSSN- 210

  Fly   156 ACVFSLCGEFHGTGSRIRHVTLLSGFLCMAMIFAPAMAIGILPLRIETIVLGMHFSSWRVLLLAN 220
                .|..|:.||..|.|.:.|......:.::....:|.|:              .:||:|.:..
  Rat   211 ----VLLSEWVGTSRRTRAMVLAQSNFALGLMALAGLAYGV--------------RNWRLLQIIG 257

  Fly   221 VSIPLLALVGISALPETPKYLLVQGRGDESLEVLRSIFANNSGRDPSEYPVKEVALESGGVSLSD 285
            .:...|.:.....|||:|::||.|||.:|:.::                 |::.||.:|....|:
  Rat   258 TTPIFLLVFYFWVLPESPRWLLSQGRTEEAKQL-----------------VQKAALVNGRPLASE 305

  Fly   286 VHGFLDAVRLVWHQTVP------LFYRARLWH-TLNICCIQFIIYFLAQGIFMWFPTILDELGTR 343
            :..     :||..:|.|      ||...:|.. ||.:..:.|:...|..|:              
  Rat   306 LLN-----QLVPEKTGPSGNALDLFRHPQLRKVTLILIAVWFVDSLLYYGL-------------- 351

  Fly   344 NGENTLLCTVLQGFNINSSSEDEASSCSVEVDTSTYQVMIIIAACFVVIYLIFAYIIDYMGKKNL 408
                        ||.:.....|            .|...:|.....|...|....:::.:|:|..
  Rat   352 ------------GFQVGDFGLD------------IYLTQVIFGVVEVPARLSSIPMMEKLGRKWS 392

  Fly   409 LMAWMVLT-MICLVALHYVEQFALVVIALTVVMAIGNCGGLVSTIAM--------EFYPTHINAM 464
            .:..:.|. ::|::.:........|..||.||      |...|:.|.        |..||.|...
  Rat   393 QLCTLTLAGVMCVIIIFIPGDLPTVATALAVV------GKFASSAAFTISYVYTAELLPTIIRQT 451

  Fly   465 GMCFIMMVGRLGAVVGSNILGRLLFASCDP--IFWALLALVVLLCTLGYFLPEKARSQQKK 523
            ||..:.:..|:|.::...::....:....|  ||.:|.....|||.|   ||| .|.|..|
  Rat   452 GMGLVSIFSRVGGIITPLVMLLEQYHKAIPMLIFGSLPIGAGLLCAL---LPE-TRGQTLK 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15221NP_001096957.1 2A0115 36..488 CDD:273327 85/412 (21%)
MFS 51..488 CDD:119392 85/412 (21%)
Slc22a13NP_001119757.1 2A0119 12..510 CDD:273328 99/451 (22%)
MFS 139..500 CDD:119392 93/440 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346922
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.